Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13012g00001 ATGATGAAAACAAATTTTGAACACGAAGAAGCTTGTACTCAACTTTCATCTGGTGATGATGACTTGTTTGATGTCTTGGGTTTGGATTTCAAAAGGAAACTGCTGAACGGAAACTGGAATTCGTTATTTGCCGATGAAACAGATGCCAGTGAAGAAAAACATGACAAAAAGGCAACGTGTAAGAATTTTCCGGTTGTAGGTCATGATAATATTTTCCCGGTTAATGAAGCAATATCAGACAACGGAATCTTCTCTGGAACAAACACTGATCACCTCTTAGATGCTGTGGTCTCGAAGAATCAATCTGCTGCGAATCAGAATTCTGATGAAATGTCTTGCAGGACCACAGTAACAAGGATTAGTACCGCGTCTGTTCTTTCTCCTACCGGAATGCAGATTATGCGCAATCATGTTGGTCAGGGTGCACCATTTGATTTTCCCAAGACGGAGGTTAAAACAGGTGCTGCAGAAACGAGTTCTCTGATTTCCGGCGGCAGCAAAGATAATGTTGGAAACTGTTCTCAAACGACTTCCATATATGGTTCTCAGCTTAGTTCGTGGGTGGAGAATAGTAGCACCAATATGAAGCGTGAAAATAGTGTTTCAACTGGATACTCTAAGCGGCCAGATGAAGTTAGCAAATCAAATCGTAAAAGGCTTAAACCTGGAGAGAACCCTAGACCTCGACCCAAAGATCGCCAAATGATTCAAGATCGCGTGAAAGAGTTGCGCGAAATTGTGCCTAATGGAGCAAAATGTAGCATAGATGCGCTTCTTGAACGAACTATCAAACATATGCTTTTCTTGCAAAGTGTGACCAAGCATGCTGACAAGCTGAAACAGACTGGGGAATCGAAGATTATTAGTAAAGAAGGCGGTTTGTTATTAAAAGACAACTTTGAGGGAGGTGCTACATGGGCATATGAG 927 0.4175 MMKTNFEHEEACTQLSSGDDDLFDVLGLDFKRKLLNGNWNSLFADETDASEEKHDKKATCKNFPVVGHDNIFPVNEAISDNGIFSGTNTDHLLDAVVSKNQSAANQNSDEMSCRTTVTRISTASVLSPTGMQIMRNHVGQGAPFDFPKTEVKTGAAETSSLISGGSKDNVGNCSQTTSIYGSQLSSWVENSSTNMKRENSVSTGYSKRPDEVSKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIISKEGGLLLKDNFEGGATWAYE 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13012g00001 309 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 2 309 IPR043561 GO:0003700|GO:0006355
Trme13012g00001 309 MobiDBLite consensus disorder prediction 210 233 - -
Trme13012g00001 309 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 220 269 IPR011598 GO:0046983
Trme13012g00001 309 CDD bHLH_AtLHW_like 224 293 - -
Trme13012g00001 309 MobiDBLite consensus disorder prediction 190 209 - -
Trme13012g00001 309 MobiDBLite consensus disorder prediction 190 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13012g00001 Trme-Chr13012 77 1240 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13012g00001 9 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 45.338 4.24e-67 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13012g00001 - - gmx:100812899 470.314