Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1299251g00001 ACCATGTCTGAGGTGGAAAAACATAATAACTCTGATTCTGCTTGGATCATCGTTGACGGTCACATCTACGATTGCACTCACTACCTCAAAGACCACCCTGGAGGAGTCGATAGCATCCTCATCAACGCCGGCACTGATTGTACCGAGGAGTTTGAAGCCATCCACTCTGATAAAGCAAAGAAAATGCTTGAAGATTACTTGATTGGC 207 0.4541 TMSEVEKHNNSDSAWIIVDGHIYDCTHYLKDHPGGVDSILINAGTDCTEEFEAIHSDKAKKMLEDYLIG 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1299251g00001 69 Pfam Cytochrome b5-like Heme/Steroid binding domain 1 69 IPR001199 -
Trme1299251g00001 69 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 1 69 IPR001199 -
Trme1299251g00001 69 PRINTS Cytochrome B5 signature 59 69 IPR001199 -
Trme1299251g00001 69 PRINTS Cytochrome B5 signature 22 32 IPR001199 -
Trme1299251g00001 69 PRINTS Cytochrome B5 signature 47 54 IPR001199 -
Trme1299251g00001 69 PRINTS Cytochrome B5 signature 32 46 IPR001199 -
Trme1299251g00001 69 PANTHER CYTOCHROME B5 1 69 - -
Trme1299251g00001 69 FunFam Sulfite oxidase, mitochondrial 1 69 - -
Trme1299251g00001 69 SMART Cyt_b5_2 1 69 IPR001199 -
Trme1299251g00001 69 Gene3D - 1 69 IPR036400 -
Trme1299251g00001 69 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 28 35 IPR018506 GO:0020037
Trme1299251g00001 69 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 1 69 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1299251g00001 Trme-Chr1299251 1 207 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1299251g00001 1 69 NADPH P450 reductases AT5G48810 47.143 2.86e-20 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1299251g00001 K10534 - gmx:732634 132.109