Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme129887g00001 ATTAAGTACTATAATGGTTGTTTATTTCACACCGTTCAAAAGGATTTCACTGCCCAAACTGGTGATCCAACTGGAACTGGCAATGCTGGTGATTCTATCTACAAGTAA 108 0.3796 IKYYNGCLFHTVQKDFTAQTGDPTGTGNAGDSIYK 35
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme129887g00001 35 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4 1 35 IPR035542 -
Trme129887g00001 35 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 31 IPR002130 GO:0000413|GO:0003755
Trme129887g00001 35 Gene3D - 1 35 IPR029000 -
Trme129887g00001 35 SUPERFAMILY Cyclophilin-like 2 34 IPR029000 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme129887g00001 3 34 U-box Gene Family AT5G67530 56.250 1.42e-07 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme129887g00001 K12735 - jre:109003438 76.2553