Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme1296170g00001 | CGGCGAGAAGCTGCAACCACCGTGAGAATGCTCGCTAAGGAGAATTTGGAAGTTCGTGAAACTCTCGCCATGCTCGGAGCGATTCCGCCTCTCGTCACAATGCTCGATTCGCAAGACGTTGATTCTCAGATCGCTTCCCTCTACGCGTTGCTCAATCTCGGAATCGGAAACGATGCGTGA | 180 | 0.5333 | RREAATTVRMLAKENLEVRETLAMLGAIPPLVTMLDSQDVDSQIASLYALLNLGIGNDA | 59 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme1296170g00001 | 59 | PANTHER | ARM REPEAT SUPERFAMILY PROTEIN | 1 | 58 | - | - | |
Trme1296170g00001 | 59 | Pfam | Armadillo/beta-catenin-like repeat | 18 | 53 | IPR000225 | GO:0005515 | |
Trme1296170g00001 | 59 | Gene3D | - | 1 | 59 | IPR011989 | - | |
Trme1296170g00001 | 59 | SUPERFAMILY | ARM repeat | 1 | 58 | IPR016024 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme1296170g00001 | 1 | 55 | U-box Gene Family | AT3G54850 | 49.091 | 3.17e-08 | 45.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme1296170g00001 | - | - | psat:127098188 | 105.916 |