Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1296170g00001 CGGCGAGAAGCTGCAACCACCGTGAGAATGCTCGCTAAGGAGAATTTGGAAGTTCGTGAAACTCTCGCCATGCTCGGAGCGATTCCGCCTCTCGTCACAATGCTCGATTCGCAAGACGTTGATTCTCAGATCGCTTCCCTCTACGCGTTGCTCAATCTCGGAATCGGAAACGATGCGTGA 180 0.5333 RREAATTVRMLAKENLEVRETLAMLGAIPPLVTMLDSQDVDSQIASLYALLNLGIGNDA 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1296170g00001 59 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 58 - -
Trme1296170g00001 59 Pfam Armadillo/beta-catenin-like repeat 18 53 IPR000225 GO:0005515
Trme1296170g00001 59 Gene3D - 1 59 IPR011989 -
Trme1296170g00001 59 SUPERFAMILY ARM repeat 1 58 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1296170g00001 1 55 U-box Gene Family AT3G54850 49.091 3.17e-08 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1296170g00001 - - psat:127098188 105.916