Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12945g00001 AAAGATGAAACTAGACAGCCACTTTCAAGGAAAGTGGCAATACCTTCAGGAAGACTCAGTCCTTATAGAATGATGGTTGTGACTAGGTTGATCCTTCTAATACTCTTCTTTGAGTACAGAATCTTCCATCCAGTACCTGAAGCAATTGGACTTTGGTTCATATCTGTATCATGTGAAATCTGGCTTGCATTGTCATGGATGGTTGATCAGATTCCCAAATGGTTTCCCATTGATCGCGAGACATACCTTGATCGCCTTTCAGTCAGGTTTGAACCGGAAAACAAGCCGAACATGCTATCTCCTATTGATATCTTTGTAACAACTGCGGATCCAATCAAGGAACCGCCTCTTGTTACAGCGAATACTATTCTTTCAATTTTGGCACTAGATTATCCTTCGCACAAAATCTCATGCTACGTTTCTGATGACGGTGCTTCCATGCTCACCTTTGAAGCTCTTCAAGAAACCGCTGAATTTGCACAAAAATGGGTACCTTTTTGTAAACAATTCTCCGTAGAGCCTCGAGCACCAGAGAAGTATTTCTCTGAGAAGGTAGATTTTCTGAAGGATAAGATTCAGACCACATATGTAAAAGAACGCCGTACTATGAAGAGAGAATATGAAGAATTTAAAGTGAGAATCAATGCACTTGTGGCTAAATCCATGAGAGTTCCCGCAGAAGGATGGAGTATGAAAGATGAGACGCCATGGCCAGGAAACAATACAAAAGATCATCCAAGTATGATACAGATCCTTCTTGGTCATAATGGAGGAGACAATAAAGATAACGAACTTCCGTCTCTTGTCTACATCTCTAGAGAGAAAAGGCCTGCATTTCAACATCACACAAAAGCCGG 857 0.4107 KDETRQPLSRKVAIPSGRLSPYRMMVVTRLILLILFFEYRIFHPVPEAIGLWFISVSCEIWLALSWMVDQIPKWFPIDRETYLDRLSVRFEPENKPNMLSPIDIFVTTADPIKEPPLVTANTILSILALDYPSHKISCYVSDDGASMLTFEALQETAEFAQKWVPFCKQFSVEPRAPEKYFSEKVDFLKDKIQTTYVKERRTMKREYEEFKVRINALVAKSMRVPAEGWSMKDETPWPGNNTKDHPSMIQILLGHNGGDNKDNELPSLVYISREKRPAFQHHTKAG 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12945g00001 286 Pfam Cellulose synthase 102 286 IPR005150 GO:0016020|GO:0016760|GO:0030244
Trme12945g00001 286 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 286 - -
Trme12945g00001 286 Coils Coil 200 220 - -
Trme12945g00001 286 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 90 212 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12945g00001 Trme-Chr12945 415 1583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12945g00001 2 286 Cell Wall Biosynthesis AT5G17420 70.979 2.68e-152 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12945g00001 K10999 - gmx:100777270 519.235