Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12934g00001 ATGCCTTCCTTTAGGGGCAAGAAAAAGGGTGAAAATGGAGAGCTCCGAGTTGGAGTCAGGAGGCTCATGAGACAGCAAAGCAATGTGCCATCTTCTGTTATATCTAGTCACAGCATGCATCTTGGTGTTTTGGCCACTGCATCTCATGCCATTTCCACCGGAACATTGTTTTCTGTGTTTTACAAGCCCAGAACAAGCCGGTCAGAGTTTATTGTAAGTATTAACAAGTATCTTGAAGCTCGAAATCATAAGCTTTCTGTTGGGATGCGATTCAAAATGAGGTTCGAGGGTGATGAAGTACCTGAAAGAAGGTTCAGTGGTACAATTGTGGGTGTTGAAGATAATAAATCGTCCGTTTGGGCTGATTCTGAGTGGCGTTCATTAAAGGTTCAATGGGATGAACCGTCATCAATTCTGCGTCCAGATAGAGTTTCTCCATGGGAATTGGAGCCACTTGTATCTACCCCTCCTGCAAACGCCCAGCCAACCCAACGAAACAAGAGATCACGGCCTCCTGTTCTCCCTTCAACAATTCCCGATTCTTCTCTGCAAG 553 0.4539 MPSFRGKKKGENGELRVGVRRLMRQQSNVPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFIVSINKYLEARNHKLSVGMRFKMRFEGDEVPERRFSGTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPANAQPTQRNKRSRPPVLPSTIPDSSLQ 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12934g00001 184 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 11 175 IPR044835 GO:0003677|GO:0006355|GO:0009725
Trme12934g00001 184 MobiDBLite consensus disorder prediction 149 184 - -
Trme12934g00001 184 Pfam Auxin response factor 47 129 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Trme12934g00001 184 MobiDBLite consensus disorder prediction 156 184 - -
Trme12934g00001 184 FunFam Auxin response factor 84 156 - -
Trme12934g00001 184 Gene3D - 84 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12934g00001 Trme-Chr12934 121 1457 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12934g00001 9 176 B3 DNA Binding Superfamily AT1G59750 81.176 3.86e-95 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12934g00001 K14486 - gmx:100793224 324.324