Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme129218g00001 ATGTTTTCATTCACTTCAAGGGCTGCATTTGGTAAAAAATACAACGAGCAAGACGAGTTTGTAGCGGCGGTAAGAGAAATATTGCAGCTAGCAGGTGGTTTTTACATTGGAGACTTATATCCTTCGGCGAAATGGCTTCAAAACCTCACTGGAATGAGGCCTAAGCTCGAGAAGTTGCATCAAAAAGTTGATAAAATACTTGATATGATCATCAATGATCATAAAGAGACAAAGTTGAGAACTAAAGATGAATTAGTTGAAGGAAAGGAAGATTTGATTGATGTTCTCTTGAAATATGAGGATGGTAACAACAATGATCAGGAACTTTCCTTAACTACAAGAAATATCAAGGCTGTACTCTTTGTATGA 369 0.3659 MFSFTSRAAFGKKYNEQDEFVAAVREILQLAGGFYIGDLYPSAKWLQNLTGMRPKLEKLHQKVDKILDMIINDHKETKLRTKDELVEGKEDLIDVLLKYEDGNNNDQELSLTTRNIKAVLFV 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme129218g00001 122 Pfam Cytochrome P450 1 120 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme129218g00001 122 Gene3D Cytochrome P450 1 122 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme129218g00001 122 PANTHER OS08G0105600 PROTEIN 3 121 - -
Trme129218g00001 122 SUPERFAMILY Cytochrome P450 2 121 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme129218g00001 Trme-Chr129218 1 438 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme129218g00001 7 121 Cytochrome P450 AT5G07990 32.759 5.32e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme129218g00001 - - lja:Lj0g3v0164489.1 161.384