Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme128973g00001 AAGGAGAAGCTAGTGTTGTACGAGTTTATGTCAAACGGAGACTTAGGCCGGTGGCTACACGAACTACCAACGGGTGAAACCAATGTGGAGGATTGGAGTAGCGACACGTGGGAGATTCAAAACGGCGTTGGTTCACAAACCCCCTCACCGGAAAAAATGGGTTGGCCAACACGACACCGTATCGCTATAGGAGTAGCGCGTGGTCTTGCTTTTCTCCACCATGCAGGTTCAAAGCCCGTCGTTCACGGCCATTTGGTAACATCAAATGTCCTACTCGCTGATGATTTCGAGCCTCGAATTGCTGATTTTGGGTTTCGAAAATTCGGGCAACAATGTCCTCCGAATTGTAGCACCGAAACAGATGTTTATTGCTTTGGTGC 380 0.4895 KEKLVLYEFMSNGDLGRWLHELPTGETNVEDWSSDTWEIQNGVGSQTPSPEKMGWPTRHRIAIGVARGLAFLHHAGSKPVVHGHLVTSNVLLADDFEPRIADFGFRKFGQQCPPNCSTETDVYCFGA 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme128973g00001 127 Gene3D Transferase(Phosphotransferase) domain 1 1 127 - -
Trme128973g00001 127 Pfam Protein tyrosine and serine/threonine kinase 3 107 IPR001245 GO:0004672|GO:0006468
Trme128973g00001 127 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme128973g00001 127 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 118 - -
Trme128973g00001 127 SUPERFAMILY Protein kinase-like (PK-like) 4 126 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme128973g00001 Trme-Chr128973 221 600 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme128973g00001 1 126 Receptor kinase-like Gene Family AT5G07280 34.014 9.23e-21 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Trme128973g00001 PK_Tyr_Ser-Thr 1.7e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme128973g00001 - - gmx:100778920 225.328