Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme128769g00001 CCTAAGTTTTGCCGCGAATGTTGCTGCATTCTTTGTAAGAAAGCCGTTGATTCAACTCATGGTGGCAATAGCTATATCCTGTGCGAAGAAAAACACGGCGATAATATTTGTGGGCATCTCTGTCATCTGGAATGCGCTTTTCAAATTTACAAGGCCGGCACCTTGAGGGGAGTTTTTGATTTGGATGCTGAGTATTTTTGCTGGCGTTGTAATGCGAAGACTAAACTAATTTCTCATGTGAATAAGCTTCTGCTGGCGTCCGAAGCTATTGATTCAGATGATGATGTCAAGGAAAAAATGTTAAATCTTGGCATTAATCTCTTACGTGGTTCAGAGAAAGCCGCTGCAAAGGAGCTTATGGGTCGAATTGCATTGGCCATGTCAAAGCTCAAACCTGGGACTAATACTGAAGATATCTTGAATGTTGCTGATGAAGTTAGAGCTCATTTTTTCAGGTACATGTTATGTTGA 471 0.4119 PKFCRECCCILCKKAVDSTHGGNSYILCEEKHGDNICGHLCHLECAFQIYKAGTLRGVFDLDAEYFCWRCNAKTKLISHVNKLLLASEAIDSDDDVKEKMLNLGINLLRGSEKAAAKELMGRIALAMSKLKPGTNTEDILNVADEVRAHFFRYMLC 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme128769g00001 156 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 1 142 - -
Trme128769g00001 156 Pfam PHD - plant homeodomain finger protein 2 103 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme128769g00001 Trme-Chr128769 1 572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme128769g00001 3 127 PHD Gene Family AT3G24440 27.907 4.53e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme128769g00001 - - tpra:123898368 286.189