Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12863g00001 TGCCTTTACGTGATGGCAGATATGATTGCGAATATAATTGTGATTGTTGTGACCGTTGCAACTGCGGCAGCGGCTATATATTTGGCAAGACCTCTCCTTCCACAACTGAAGACAAGCTTTAAATACTTTCAAGGATGGTTACTAATGTGGGGACAATATCTTTTCCGCAACCAAATTGTAGAGAAGATAAAGGCAATGAGAAAATTCAGAGGCAAAAGCAAAGATATTCAACCATTTTCTCATCTTGATTCGCTACCAGGTATTCAGTATGAATTATCTGAAGACTTTGTTTATTTCAGATCAACAAAAAGGGCTGATGATGAACTCTTTGAGACACTCGAGGATAACTCCATCCATATGATAGGATTGTATGGAGAGGGTGGATCTGGAAAAACAACTCTTGTAACTGAAGTTGGCAAGAAGGCTGAGGATTTGGAAATGTTTGATAAGGTTATATCAATCACTGTGGAGCGAACTCCAAATATTAGAGCCATTCAAGGACAAATTGCAGATATGTTAAAATTGAAACTGGTTGAAGAAAGCGAAAGGGGAAGAGCACAACGTTTATGGATGAGTTTAAAACAAAAGAAGCGAATTCTTATCATAGTAGACAGTGTATGGAGAGAGTTCAAATTGAAGGATATCGGGATTCACTTAGATGATGTTATCAAGAAAACTTGGAAGATCCTCATAACAACTCGTCATGAGCGTGTTTGTACATCAATGAACTGTCAAAAGAAGATTCATTTGGAGCTCTTGTCTGAAGATGAGTCTTGGAATTTATTCCAAAAGTTTGCAAGAATTGATGACGAATACTCCAAGATATTGGATGATGTGCCACGAAAAATATGCAATGAATGTATGGGACTTCCCATAGCAATCAAAATTGTGGGGTCATTATTCAAAGAGAGGAAGGAAATTGAGTGGAAGCAGGCGTTTCAGAAGTTAAGGGATTCAAAGGCATCTGATGATGAAGATAATGCTACTTTGTGCGTTAAATTAAGCTATGATTATTTGCCAACGAAAAAAGCACAACAAATCTTTCTATTGTGTGCTCTTTTTCCAGAAGAATATCACATCCCAACAGAAGATTTGGTGAGGTATGCACTTGG 1112 0.3768 CLYVMADMIANIIVIVVTVATAAAAIYLARPLLPQLKTSFKYFQGWLLMWGQYLFRNQIVEKIKAMRKFRGKSKDIQPFSHLDSLPGIQYELSEDFVYFRSTKRADDELFETLEDNSIHMIGLYGEGGSGKTTLVTEVGKKAEDLEMFDKVISITVERTPNIRAIQGQIADMLKLKLVEESERGRAQRLWMSLKQKKRILIIVDSVWREFKLKDIGIHLDDVIKKTWKILITTRHERVCTSMNCQKKIHLELLSEDESWNLFQKFARIDDEYSKILDDVPRKICNECMGLPIAIKIVGSLFKERKEIEWKQAFQKLRDSKASDDEDNATLCVKLSYDYLPTKKAQQIFLLCALFPEEYHIPTEDLVRYALG 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12863g00001 371 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 351 IPR027417 -
Trme12863g00001 371 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 49 369 - -
Trme12863g00001 371 PRINTS Disease resistance protein signature 120 135 - -
Trme12863g00001 371 PRINTS Disease resistance protein signature 287 301 - -
Trme12863g00001 371 PRINTS Disease resistance protein signature 193 207 - -
Trme12863g00001 371 Gene3D - 252 339 IPR042197 -
Trme12863g00001 371 Pfam NB-ARC domain 107 336 IPR002182 GO:0043531
Trme12863g00001 371 Gene3D - 88 251 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12863g00001 Trme-Chr12863 476 1587 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12863g00001 118 354 WRKY Transcription Factor Family AT5G45050 26.337 3.60e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12863g00001 - - tpra:123914509 449.899