Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme128541g00001 ATGGAAGAATTAAGATTTCTTAGATTAAATGTCCCTCGAGGGAAGAAGAGACTGACTACTGTGTCAATTCCTGATGATCTCATGCCTTTTCCTGATAAATTGAGGTATCTTGAGTGGAATGGGTACCCGTTAAAGACTCTTCCACAACCTTTTGGTTCTGAGCTACTTGTTGAGATTCGTATGCCGCATAGTGATGTTGAGTATCTTTGGAACGGGAAGCAGAATCTTGTGAATTTAGAAGGAATCGATCTAAGTGAATGCAAAAAGTTGGTTAAACTTCCTAATTTGTCCTGGGCATCAAAACTCAAATGGTGCATAAAACTGAAAAATCTTATTAGTGAGGAGCATTTGACATCCCTTGAGAAGATCGATGTATATGGATGCTCCGGCCTAAAG 396 0.3939 MEELRFLRLNVPRGKKRLTTVSIPDDLMPFPDKLRYLEWNGYPLKTLPQPFGSELLVEIRMPHSDVEYLWNGKQNLVNLEGIDLSECKKLVKLPNLSWASKLKWCIKLKNLISEEHLTSLEKIDVYGCSGLK 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme128541g00001 132 SUPERFAMILY L domain-like 23 128 - -
Trme128541g00001 132 Pfam Leucine Rich Repeat 56 74 IPR011713 -
Trme128541g00001 132 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 131 IPR044974 GO:0006952
Trme128541g00001 132 Gene3D Ribonuclease Inhibitor 1 132 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme128541g00001 Trme-Chr128541 10 581 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme128541g00001 1 131 WRKY Transcription Factor Family AT4G12020 33.333 1.57e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme128541g00001 - - cam:101488696 187.963