Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme128535g00001 ATGAGACTGAGTAAGTACCCAGTTAACTCAAAAGGACTTATTGGAATCGACAAATCAGTTGCACATTTGGAATCATTGTTAAAAAAAGAGTCAAAAAAGGTCCGTGTCATTGGAATTTGGGGTATGGGAGGTATTGGCAAGACAACTATTGCAGAAGAAATATTTAGCCAAAATCATTTTGAATATGAAGAAGATGTGAAAATTGATACACCAAATAGGTTGTCCAGTGATATTGAGAGAAGGATTGGTCGCATGAAGGTTCTTATTGTTCTTGATGATGTCAAGGATACAGATCAGCTAGAGATGTTATTTGGAACTCTTGATTGGTTTCGATCCGATAGTAGAATAATTGTAACAACAAGAGATAAGCAAGTACTTATTGCTAATGAAGCTGATGAT 399 0.3534 MRLSKYPVNSKGLIGIDKSVAHLESLLKKESKKVRVIGIWGMGGIGKTTIAEEIFSQNHFEYEEDVKIDTPNRLSSDIERRIGRMKVLIVLDDVKDTDQLEMLFGTLDWFRSDSRIIVTTRDKQVLIANEADD 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme128535g00001 133 Gene3D - 1 64 IPR027417 -
Trme128535g00001 133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 127 IPR027417 -
Trme128535g00001 133 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 126 IPR044974 GO:0006952
Trme128535g00001 133 Pfam NB-ARC domain 24 57 IPR002182 GO:0043531
Trme128535g00001 133 Pfam NB-ARC domain 64 125 IPR002182 GO:0043531
Trme128535g00001 133 Gene3D - 65 131 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme128535g00001 Trme-Chr128535 1 489 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme128535g00001 13 132 WRKY Transcription Factor Family AT4G12020 37.748 3.52e-21 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme128535g00001 - - tpra:123920755 180.259