Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12834g00001 GGATCTTTCGGTGAGATTTTGAAAGCCCATTGGCGTGGAACGCCAGTTGCTGTCAAGCGCATTCTTCCATCTCTTTCAGAAGATAGAATGAGGAAGTGGGTAGGGAGAGAGGCACACAGACTTGTGGTTAAGCTGGTACTTTTGCTGCAACAAACCATATTTTCTGTCCTAGTTCCTAGTCAGGACTTTAGGCATGAGGTCAATTTATTGGTGAAGCTTCGACACCCCAATATAGTTCAGTTTCTTGGAGCCGTTACCGACAGGAAGCCCCTCATGTTAATTACTGAGTATCTAAGAGGGGGTGATCTTCACCAGTACCTCAAAGATAAAGGTTCGCTTAGCCCTTCAACAGCTATCAACTTTTCCATGGATATTGCCAG 380 0.4526 GSFGEILKAHWRGTPVAVKRILPSLSEDRMRKWVGREAHRLVVKLVLLLQQTIFSVLVPSQDFRHEVNLLVKLRHPNIVQFLGAVTDRKPLMLITEYLRGGDLHQYLKDKGSLSPSTAINFSMDIA 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12834g00001 126 Pfam Protein tyrosine and serine/threonine kinase 60 126 IPR001245 GO:0004672|GO:0006468
Trme12834g00001 126 ProSiteProfiles Protein kinase domain profile. 1 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme12834g00001 126 Gene3D Transferase(Phosphotransferase) domain 1 45 126 - -
Trme12834g00001 126 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 126 - -
Trme12834g00001 126 SUPERFAMILY Protein kinase-like (PK-like) 1 126 IPR011009 -
Trme12834g00001 126 Gene3D Phosphorylase Kinase; domain 1 1 44 - -
Trme12834g00001 126 FunFam serine/threonine-protein kinase STY46-like 32 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12834g00001 Trme-Chr12834 241 1097 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12834g00001 1 126 MAP Kinase Kinase Kinase AT1G14000 67.460 3.83e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Trme12834g00001 PK_Tyr_Ser-Thr 6.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12834g00001 - - adu:107481197 171.785