Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme128068g00001 CGTGCTGTAATTGGTTCCGTGGTTGATAAAAGAGTCAGTGCTGTACAATTGACAAGAGATCACAACTGTAATGATGAGGCCATTCGACAAGAACTCATCTCATTGCACCCCGATGATCCTACCATTGTGATGGAGAAGAACGGGTGGCGCGTTAGTAGAAGTATTGGTGATACATATTTGAAGAGGCCTGAATTTTCGTTGCGGGATTCGTTCCCGAAATATGAAGATGTTCCTGATCCTTTTACTAGAGGAGTGGTATCTGCAGAACCAGAGATGCTTACTAGAGCTATAGCAGAAACTGATAAGTTTCTTATATTTGCTTCTGATGGACTTTGGGAGCTCATTACAAATGATCAAGCAGTTCAAATTGTTCATAAGAATCCAAGAAAT 390 0.4103 RAVIGSVVDKRVSAVQLTRDHNCNDEAIRQELISLHPDDPTIVMEKNGWRVSRSIGDTYLKRPEFSLRDSFPKYEDVPDPFTRGVVSAEPEMLTRAIAETDKFLIFASDGLWELITNDQAVQIVHKNPRN 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme128068g00001 130 PANTHER PROTEIN PHOSPHATASE 1 128 IPR015655 GO:0004722|GO:0006470
Trme128068g00001 130 Pfam Protein phosphatase 2C 9 127 IPR001932 -
Trme128068g00001 130 Gene3D - 1 130 IPR036457 -
Trme128068g00001 130 SUPERFAMILY PP2C-like 13 126 IPR036457 -
Trme128068g00001 130 ProSiteProfiles PPM-type phosphatase domain profile. 1 130 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme128068g00001 Trme-Chr128068 19 603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme128068g00001 1 129 PP2C-type Phosphatase Gene Family AT5G06750 55.319 1.05e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme128068g00001 K01102 - aew:130781404 149.058