Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12770g00001 GCTGGGATGCTGGATCCACCAAGAGATGAAGTAAGAAATGCCATGCTTTCATGTATGACTGCTGGCATACGTGTTATAGTTGTCACTGGAGATAACAAGTCCACTGCTGAGTCGCTTTGCCGCAAGATAGGTGCTTTTGACCATATGATAGATTTTACTGAACATTCTTACACTGCTTCTGAGTTTGAAGAACTTCCAGCAATACAACAAACTATAGCATTGCAGCGAATGGCACTTTTTACCAGGGTCGAGCCTTCCCACAAAAGGATGCTGGTTGAAGCATTGCAGCACCAAAATGAAGTGGTGAAACGTGCAAAACGGGTTTACAGACAAGTCTGCCTGGCTGGTGAACCCCTTATCCGGTGGAAAAAGGGTTTCAATGCAAGACAAGTGGCTTCTTGTGCATTAAGGAAATATGCATTAAGGAAAGATTACTGTGATATCCATAAAGTAATGCCCAGGGAAACTCAGAAGGGTGGGAAAATATTGGTTTTTGACCCTGTACGTGGAAGGACAGACCCAATGAGTAGCACTGCAATGGCTGTAGTTAGTACCCTTGATGTGCACGACAGACCCGATGAGTAG 585 0.4462 AGMLDPPRDEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDHMIDFTEHSYTASEFEELPAIQQTIALQRMALFTRVEPSHKRMLVEALQHQNEVVKRAKRVYRQVCLAGEPLIRWKKGFNARQVASCALRKYALRKDYCDIHKVMPRETQKGGKILVFDPVRGRTDPMSSTAMAVVSTLDVHDRPDE 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12770g00001 194 Gene3D - 7 102 IPR023214 -
Trme12770g00001 194 PANTHER CALCIUM-TRANSPORTING ATPASE 2 102 - -
Trme12770g00001 194 Pfam haloacid dehalogenase-like hydrolase 5 99 - -
Trme12770g00001 194 SUPERFAMILY HAD-like 3 102 IPR036412 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12770g00001 2 102 Primary Pumps ATPases(2) AT1G10130 84.158 2.75e-54 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12770g00001 K05853 - gmx:100783509 195.667