Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1276g00001 ATGATTATTTCAAGAGTTGTGGACATTGTGAGAGCTAAAGGTGGCACAATAACTAGAGAGCCCGGTCCGGTCAAGGGAGGCGACTCAAATATTGCAGTTATCGAAGACCCTGATGGCTATAAGTTTGAACTTTTGGAAAGGGCTCCCTGTCCCGAACCCTTGTGCAAAGTAATGCTTCGGGTGGGTGATCTCGATCGATCCATAAAATTTTATGAGAAGGCTGTGGGTTTGGAGCTTCTTCGTAAACAAGACAATCCAGGATCCAAGTGTACCGTTGCAATAATGGGTTATGGTCCAGAAGAAAAAAGTACTGTTCTGGAGTTAACTTCCAACTACGGAGTCACGACTTATGATAAAGGAGATGCATATGCTCAGATTACAATAGGCACGGATGATGTGTACAAAACTGCAGAAGCAATTAAACTTGCTGGAGGGAAGATTACTCATGCCGGACCAGTACCCGGTTACAAAACAAAAATTACATCATGTGTGGATCCCGATGGTTGGAAAACG 513 0.4386 MIISRVVDIVRAKGGTITREPGPVKGGDSNIAVIEDPDGYKFELLERAPCPEPLCKVMLRVGDLDRSIKFYEKAVGLELLRKQDNPGSKCTVAIMGYGPEEKSTVLELTSNYGVTTYDKGDAYAQITIGTDDVYKTAEAIKLAGGKITHAGPVPGYKTKITSCVDPDGWKT 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1276g00001 171 Gene3D - 50 171 IPR029068 -
Trme1276g00001 171 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 6 49 IPR029068 -
Trme1276g00001 171 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 55 169 IPR029068 -
Trme1276g00001 171 Gene3D - 3 48 IPR029068 -
Trme1276g00001 171 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 53 171 IPR037523 -
Trme1276g00001 171 PANTHER LACTOYLGLUTATHIONE LYASE 3 171 - -
Trme1276g00001 171 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 1 47 IPR037523 -
Trme1276g00001 171 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 57 169 IPR004360 -
Trme1276g00001 171 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 44 IPR004360 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1276g00001 Trme-Chr1276 796 3158 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1276g00001 54 169 Calmodulin-binding Proteins AT1G08110 24.113 2.81e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1276g00001 K01759 - gmx:100802155 284.263