Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12766g00001 ATAGAGCAATGTAAATGTGCACTAGATCGTTATGAAAAGATTCCTGATAAAAAGATCCAAAGGATACTACAACTGAGCTTTGATGCTTTGCAGGAAGAAGAGAAGTTTGTTTTTCTTGACATTGCCTGTTGCTTCAAAGGATATAAATTGACAAGGGTCGAACAAATACTTCATGCTCATCATGGTGATGCCATGAGAGATCACATTAGTGTGTTAGTGGAAAAATCTCTCATAAAAATCAGTGAGTCTGGTATTGTGACTTTGCATGATTTGATAGAGGAAATGGGGAAAGAAATTGTTAGACGAGAATCACCGGATCCTGGAAAACGCAGTAGGTTATGGGCCTCTGAAGATATAATTCAAGTTTTAGAAGAAAATACGGGAACAAGTAAAATTGAAATTATATATCCAAACTCCCGGATTGAAGTAGAATGGGATGGASAGGCATTCAAGAAGATGGAAAACCTCAGAACACTAATTATTAAGSATGGCAAATTTACTGAAAGTCCCAAACATCTTCYGAATAGTCTAAGAATACTCCAACTTCAACATAGTCTATGTCCGTCATGGGATTTACCGTCTGAGTTTTATCCGAGGAAACTTACCATATGCAATATTCGCACTAACTCTACATTATTCCAGTGGGGAGACTTTTTCACGCAGAAGTTCAAGAATATAAGGGTTTTAAATTTTGATCGCCATGAATTTTTAACACGGATACCAAATGTATCTGGTCTCGTAAATTTAGAAGAATTTTCATTTCAAGATTGTGTGAATTTAATCACAGTCGATGACTCCGTTGGGTTGCTGGGTAAACTTAAAACCTTGAGAGCTATGCGTTGTATCAATCTTAGGAGGATTCCGCCTCTCAAGTTGGCTTCTCTAGAAGAACTCGATCTTTCAGTGTGTTCTTGTCTTGAGAGTTTTCCACCTGTGGTAGATGGATTGCTGGGTAAACTTAAAACCATGAGCCTTAGAAGTTGCGTCAAGCTAAGGAGTATTCCAACTCTTAAGTTGACTTCGCTAGAAAAACTCGATCTTTCACATTGTTTTAGTCTAGAGAATTTTCCACTTGTGGTGGATAGTTTTCTTGGAAAACTTAAAACCCTGCTTGTTCAAAGTTGTCACAATCTCACGAGTATTCCACCTCTCAAGTTGGATTCACTAGAAAAACTTGACCTTTCACATTGTTATAATCTCAAGAGTTTTCCAAATGTGGTAGACGGTTTGTTGGATAAACTTAAATTCTTGAGCATTGAACGTTGCATCATAATTAGGAGTATCCCGCCGCTCGGGTTGACTTCGTTGGAACAGTTCAATCTTTCATATTGTCCAAGTCTAGAGAGTTTTCCAGAAA 1357 0.3758 IEQCKCALDRYEKIPDKKIQRILQLSFDALQEEEKFVFLDIACCFKGYKLTRVEQILHAHHGDAMRDHISVLVEKSLIKISESGIVTLHDLIEEMGKEIVRRESPDPGKRSRLWASEDIIQVLEENTGTSKIEIIYPNSRIEVEWDGZAFKKMENLRTLIIKXGKFTESPKHLXNSLRILQLQHSLCPSWDLPSEFYPRKLTICNIRTNSTLFQWGDFFTQKFKNIRVLNFDRHEFLTRIPNVSGLVNLEEFSFQDCVNLITVDDSVGLLGKLKTLRAMRCINLRRIPPLKLASLEELDLSVCSCLESFPPVVDGLLGKLKTMSLRSCVKLRSIPTLKLTSLEKLDLSHCFSLENFPLVVDSFLGKLKTLLVQSCHNLTSIPPLKLDSLEKLDLSHCYNLKSFPNVVDGLLDKLKFLSIERCIIIRSIPPLGLTSLEQFNLSYCPSLESFPE 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12766g00001 452 Gene3D Ribonuclease Inhibitor 138 291 IPR032675 -
Trme12766g00001 452 Gene3D Ribonuclease Inhibitor 363 452 IPR032675 -
Trme12766g00001 452 Gene3D Ribonuclease Inhibitor 292 362 IPR032675 -
Trme12766g00001 452 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 319 451 IPR044974 GO:0006952
Trme12766g00001 452 SUPERFAMILY "Winged helix" DNA-binding domain 17 124 IPR036390 -
Trme12766g00001 452 SUPERFAMILY L domain-like 144 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12766g00001 Trme-Chr12766 2 1592 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12766g00001 19 436 WRKY Transcription Factor Family AT4G12020 31.920 1.72e-34 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12766g00001 - - tpra:123907944 812.372