Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme127429g00001 GGCACTCAGGTACCGAAAAAGTTTGGATCAAGTTCAGTGAAAGATATTTCGTATGAAACGCCGAAGCCTTCCACGACTGATAATGGAATCGATAGTGTCATTGCTGTGGAACAAAAATCAAGCATTTCTTCGAGGTCTTCTGAAGGATTAAACCACAAAGGATGGAATCAAGTGGTTATTCATCAATTCAAAGTTATAAAACAGAAGATAAAACATGCAATTGTGGAATTAAAGAAAAGTGGTCACAATAAAGCTTCACCTGAATACAGCATCATTGATAATGAGAAAGAGATCTCGCAAAGCTTAGACGATGGCGCGATTCATGAATACAAAAAGAGTAGAAGCTTGAGTGAGACTAAAGCTTCTGAATCTGGTTCCAACAAATACGAACCTCACCTAATGCGAAGAACGTCATCTCTTAACGAATCGATGGATAGATATACTCAATTGTTTGAGAAAAGTTTAAGCAAAGAGGTCAAGTGGCAAAGCTCAAAGTCGAAAAGTTTAAGATTGACAAATGACGATAAGACTCAAAAGAGTAGGCATGCTCGTATGTTTTCCAGAAGCAATTTGTCTATGCCTAATCTCGAGGCATTAGGATTC 603 0.3798 GTQVPKKFGSSSVKDISYETPKPSTTDNGIDSVIAVEQKSSISSRSSEGLNHKGWNQVVIHQFKVIKQKIKHAIVELKKSGHNKASPEYSIIDNEKEISQSLDDGAIHEYKKSRSLSETKASESGSNKYEPHLMRRTSSLNESMDRYTQLFEKSLSKEVKWQSSKSKSLRLTNDDKTQKSRHARMFSRSNLSMPNLEALGF 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme127429g00001 201 PANTHER PROTEIN TRM32 10 198 IPR044257 -
Trme127429g00001 201 MobiDBLite consensus disorder prediction 1 31 - -
Trme127429g00001 201 MobiDBLite consensus disorder prediction 160 182 - -
Trme127429g00001 201 MobiDBLite consensus disorder prediction 160 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme127429g00001 Trme-Chr127429 1 603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme127429g00001 53 196 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 32.895 1.14e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme127429g00001 - - cam:101509220 259.61