Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12732g00001 ATGGAACATTTCCAAGGACATCAGAAAGGATTCCTTAATGACACCTCAACACTTTCTAACATTATCGACACCGCCAAGGCCCTAAAATTTGAGGGTTTTATTCTGACTGCAAACCCGAGCTATGGCGATTATATTGCAGAGCCAATTCCCTTTGCTATTTCTGGTATCTTGATTCCTTCTGTAGCAGATTCCGAGGTTATAATGCAATATTACGAAAAACGAACAAAAAGGGACGAGAAAGGAACTGTTACAGAATTTGGTGCTTGGGCATCTACAGGGGAAGGAAGGGTTGCGTCTTTCAAAGGGCGATCACCGGTTGTTAGTAGATTTTCTTCAAGGGGTCCAGATATCATTGATGCAAACAGAAGTCTTGCTGATGTACTTAAACCTGATATTCTTGCTCCAGGACACCAGATATGGGGACACAATTTTGCATTATTATCTGGTACCAGCATGGCGGCGCCTCATGTGGCTGGAATCGCAGCACTAATCAAGCAACATAATCCATCATGGACTCCATCTATGATAGCATCTGCAATCACCACAACAAGCTCAAACTTCCTATGCTCTTTGCCAAACATCGAAGCGAATATAATAACTACAGCGACGGGAGAACCTTGCAAGAGCCCATTTGACTATCCATCTAATTTAAACCTTCCATCAGTGACAATATCTGCACTGAAAGGATCAATTTATGTGAGAAGAACTGTGATGAATGTAGGGAACAGCACAGAGACATACTTGGGCTCTGTTCTAGCTCCTAATGGAACTACAGTTAACCTGAATCCAACTTGGTTTACCATAAGTCCACAAGGAACACAAGATCTGGATATACAAATCAATGTCGTTCGACCAATGGAAGACTTTCACTTTGGTGAAATTGTTTTGACAGGAAGTATGGACCACATA 909 0.4191 MEHFQGHQKGFLNDTSTLSNIIDTAKALKFEGFILTANPSYGDYIAEPIPFAISGILIPSVADSEVIMQYYEKRTKRDEKGTVTEFGAWASTGEGRVASFKGRSPVVSRFSSRGPDIIDANRSLADVLKPDILAPGHQIWGHNFALLSGTSMAAPHVAGIAALIKQHNPSWTPSMIASAITTTSSNFLCSLPNIEANIITTATGEPCKSPFDYPSNLNLPSVTISALKGSIYVRRTVMNVGNSTETYLGSVLAPNGTTVNLNPTWFTISPQGTQDLDIQINVVRPMEDFHFGEIVLTGSMDHI 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12732g00001 303 Gene3D Peptidase S8/S53 domain 101 187 IPR036852 GO:0004252|GO:0006508
Trme12732g00001 303 Gene3D - 31 98 - -
Trme12732g00001 303 ProSitePatterns Serine proteases, subtilase family, serine active site. 149 159 IPR023828 -
Trme12732g00001 303 Pfam Subtilase family 106 184 IPR000209 GO:0006508|GO:0008236
Trme12732g00001 303 Pfam Fibronectin type-III domain 216 297 IPR041469 -
Trme12732g00001 303 SUPERFAMILY Subtilisin-like 99 187 IPR036852 GO:0004252|GO:0006508
Trme12732g00001 303 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 185 IPR045051 -
Trme12732g00001 303 Gene3D - 215 303 - -
Trme12732g00001 303 ProSiteProfiles Serine proteases, subtilase domain profile. 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12732g00001 Trme-Chr12732 24 1503 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12732g00001 10 303 Subtilisin-like Serine Gene Family AT1G62340 52.222 3.71e-118 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12732g00001 - - psat:127138335 394.815