Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12731g00001 AAGTTAATTGGAGCAAGATTCTTCAGCAGTGCTTATGAGGCATATAATGGCAAGCTTAGCACATGGCAACTTACCGCGCGTGACTTTGTAGGCCACGGTACACATACTCTATCAACAGCCGGAGGAAACTTTGTTCCAGGTGCAAGTATATTTGCTATTGGCAATGGTACTGTAAAAGGTGGTTCACCAAGAGCTAGAGTTGCAACCTACAAAGTGTGCTGGTCTCTAACAGATGTTGCTAAATGCTTTGGTGCTGATATGTTAGCTGCTATTGACCAAGCCATTAGTGATGGTGTTGATATAATCTCACTTTCAGCTGCTGGCAATAACCTTGTCTATCCAGAAGATATTTTTACAGATGAGGTTTCAATAGGTGCATTCCATGCACTTTCTAGAAATATATTATTAGTTGCTTCTGCAGGTAATGATGGACCAGATTTAGGAACAGTTACAAATGTAGCTCCATGGGTATTCACAATTGCTGCAAGTACATTAGACAGAGATTTCAGCAGTACAATAACTTTTGGTAACAATAGAAAAGTCACGGGAGCTAGTCTTTTTGTAAACTTGCCACCAAACCAGGCATTTTCTCTGATTCTTTCTACGGATGGTAAACTTGCCAATGCGACAAATGATGACGCGCGACTTTGTAAGCCCGGAACACTTGATCCTTCAAAAGTGAAGGGGAAAATAGTGGGATGCTATCGAGAAGGAAATATAAGATCAGTTACTGAGGGTCTGGAAGCTTCAACAGCAGGCGCAAAGGGAATGCTTTTGAGAAATCGACCAAAACAAGGGAAAACAATTCTTGCTGAGCCTCATGTTTTCTCT 831 0.414 KLIGARFFSSAYEAYNGKLSTWQLTARDFVGHGTHTLSTAGGNFVPGASIFAIGNGTVKGGSPRARVATYKVCWSLTDVAKCFGADMLAAIDQAISDGVDIISLSAAGNNLVYPEDIFTDEVSIGAFHALSRNILLVASAGNDGPDLGTVTNVAPWVFTIAASTLDRDFSSTITFGNNRKVTGASLFVNLPPNQAFSLILSTDGKLANATNDDARLCKPGTLDPSKVKGKIVGCYREGNIRSVTEGLEASTAGAKGMLLRNRPKQGKTILAEPHVFS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12731g00001 277 SUPERFAMILY Subtilisin-like 15 184 IPR036852 GO:0004252|GO:0006508
Trme12731g00001 277 ProSiteProfiles Serine proteases, subtilase domain profile. 1 277 - -
Trme12731g00001 277 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 268 IPR045051 -
Trme12731g00001 277 Pfam Subtilase family 26 182 IPR000209 GO:0006508|GO:0008236
Trme12731g00001 277 Gene3D Peptidase S8/S53 domain 1 215 IPR036852 GO:0004252|GO:0006508
Trme12731g00001 277 CDD PA_subtilisin_like 172 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12731g00001 Trme-Chr12731 552 1593 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12731g00001 1 276 Subtilisin-like Serine Gene Family AT5G59810 51.625 4.09e-84 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12731g00001 - - gmx:100813564 417.927