Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12725g00001 CTTGATGTTTACATATATGATTATTTGGTGAAGAAAAAGTTGCACAATACCGCCAAGTCATTTATGACAGAAGGGAAGGTTTCTCCTGATCCAGTAGCAATTGATGCTCCTGGAGGTTTTCTGTTTGAGTGGTGGTCTGTTTTCTGGGATATTTTTATTGCAAGGACAAATGAGAAACATTCTGAGAATGCTGCAGCATATTTAGAGGCTCAACAGATTAAAGCGAAAGAACAACAATTGCAAATGCAGCAGTTGCAATTAATGCGTCATGCTCAGCTGCAAAAAAGAGATCCTAATCATCCTCCCATTGGAAGTCCTCTAAATGCTATCACCACAGAAGGAGTCCTAGGGCAATCTACTGCCACTGCTTTGGCTGCAAAAATGTACGAGGATCGGATGAAGAGCTCTAACCCTATGGATACAGAGACATCCCAACCACTTTTAGATGCTAGAATGGCCCTTTTGAAATCAACAAATCATCCCGGTCAGATGGTTCAAGCAAATTCAGGAAGTGTGACAGCTTTGCAGCAAATGCAGGCTCGAACTCAGCAAATCCCTGATATCAAAAGCGAAGTCAACATGGGAAACATGCAAAGATCCTTACCTATGGATCCTTCTTCCATTTATGGGCAGGGAGGAATGCAGTCAAAGTCTGGAATCACAAATGCAGGTCTGAA 677 0.4225 LDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSENAAAYLEAQQIKAKEQQLQMQQLQLMRHAQLQKRDPNHPPIGSPLNAITTEGVLGQSTATALAAKMYEDRMKSSNPMDTETSQPLLDARMALLKSTNHPGQMVQANSGSVTALQQMQARTQQIPDIKSEVNMGNMQRSLPMDPSSIYGQGGMQSKSGITNAGL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12725g00001 225 Coils Coil 68 88 - -
Trme12725g00001 225 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 1 217 IPR044716 GO:0003714
Trme12725g00001 225 Pfam LisH 1 25 IPR006594 GO:0005515
Trme12725g00001 225 ProSiteProfiles LIS1 homology (LisH) motif profile. 1 29 IPR006594 GO:0005515
Trme12725g00001 225 MobiDBLite consensus disorder prediction 205 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12725g00001 Trme-Chr12725 234 1594 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Trme12725g00001 LisH 2.7e-07 CL0561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12725g00001 - - gmx:100790180 372.474