Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme127257g00001 GGCCGGACTGCCGTGACAACCACATTGGCAGGCTCAACAGCTGGAATTGTCACGTTGTTTGGCCGTCGATTATTGATTGGCCACTGGGATGCAATGGATGTGTGCAATGGTTTGCTTGGTGGGTTTGTTGCCATCACATCTGGGTGCTCAGTTGTCGAGCCATGGGCNNNNNNNNNNANNNNNNNNNNANNNGCTTGGGTGTTAATTGGGCTCAACATCTTGGCACTAAAATTGAACTATGATGACCCATTAGAGGCAGCCCAGTTGCATGGTGGATGTGGCACTTGGGGTTTGTTGTTTACAGGGTTGTTTGCCAAAAAGAAGTTTGTGAATCAAACCTATAATTCAGGGGTGGCAGTGGAAAGACCTTATGGTCTTCTACTTGGAGGTGGATGGGGATTGATTGGAGCTCAAGTGGTTGAGATTTTGGTAATCTTTGTATTTGTTAGTATAACAATGGGCCCTATGTTCTATGCATTGCACAAGCTTAAGTTACTAAGAATTCCTGTGCATGATGAACTTGCTGGCCTTGATATATCAAGCCATGGAGGCTATGCTTATGCTCCTCAAGAGGAAAATCATCCTCGATCTTATGAAGATTATAT 605 0.4331 GRTAVTTTLAGSTAGIVTLFGRRLLIGHWDAMDVCNGLLGGFVAITSGCSVVEPWAXXXXXXXXAWVLIGLNILALKLNYDDPLEAAQLHGGCGTWGLLFTGLFAKKKFVNQTYNSGVAVERPYGLLLGGGWGLIGAQVVEILVIFVFVSITMGPMFYALHKLKLLRIPVHDELAGLDISSHGGYAYAPQEENHPRSYEDY 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme127257g00001 201 PANTHER AMMONIUM TRANSPORTER 2 183 - -
Trme127257g00001 201 Pfam Ammonium Transporter Family 3 187 IPR024041 GO:0008519|GO:0016020|GO:0072488
Trme127257g00001 201 SUPERFAMILY Ammonium transporter 2 168 - -
Trme127257g00001 201 Gene3D Ammonium transporter AmtB like domains 1 199 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme127257g00001 Trme-Chr127257 1 605 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme127257g00001 1 193 Inorganic Solute Cotransporters AT1G64780 63.212 1.11e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme127257g00001 K03320 - jre:118344481 323.168