Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme127190g00001 ATGGCCAAACTTGGAAAATTAACAAAACTAAAATCAGCTATCAAAAGATGGCCATCATTAACAAAACTAAACCGCAACAACAGCTCTGTCTCTGCCTCTTGCAAGCAACAGGAACAAGAACAAGACCTTCATGCTGTTTATGTTGGAAAATCGCGCCGGCGTTACCTTGTAAACTCTGAAGTTATTCAACACCCTGTTTTTCAGGAGCTAGTGGACAAGTCTTGTTGTAGTAGTGGTGGTGGTTGTGATGATGGTGTTGTGGTTGTTTCTTGTGAGGTTGTTTTGTTTGAACATTTGTTGTGGATGCTTGAAAGTGCTGAAAGTGAGACAGCACAATTGGGGTCCATGGATGAGTTGGTTGAGTTCTACAATTGTGCATGTTGA 384 0.4141 MAKLGKLTKLKSAIKRWPSLTKLNRNNSSVSASCKQQEQEQDLHAVYVGKSRRRYLVNSEVIQHPVFQELVDKSCCSSGGGCDDGVVVVSCEVVLFEHLLWMLESAESETAQLGSMDELVEFYNCAC 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme127190g00001 127 PANTHER EXPRESSED PROTEIN 14 124 - -
Trme127190g00001 127 Coils Coil 20 40 - -
Trme127190g00001 127 Pfam Auxin responsive protein 15 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme127190g00001 Trme-Chr127190 198 581 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme127190g00001 3 111 Calmodulin-binding Proteins AT4G34750 26.364 2.48e-08 47.8