Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme127101g00001 ATGGTTGAGGAAGATACACAAGGAAAGAGGAGAATCATCATAATCAGCGTATCAACGTTTTTACTAGTGGCTATGGTGGTTGCGGTTACCGTTGGCGTAAATTTTAAATCTATCAATGGTTCTGATTCTGAAAATAACACCGACGATAAGCCTCGCGTGGCTTCAACTGTAAAAGCAGTGAAAGCCTTTTGCAGACCAACNGATTATAAAAAAGAATGCGAGGAGAGTCTATTAGCAAATGTCGGCAACACAACAGATTCAAGAGAACTCATTAAATTTGCTTTCAATATTACCATTGGAAAAATCGGGGAAGGAATCAAGAAAACCAATTTATTGCAAGAGGTTGAGAAGGAACCTAGGGCGAAAATGGCACTTGACACATGCACGAAATTAATGGATCTATCAATTGGCGAATTCGATAG 422 0.391 MVEEDTQGKRRIIIISVSTFLLVAMVVAVTVGVNFKSINGSDSENNTDDKPRVASTVKAVKAFCRPTDYKKECEESLLANVGNTTDSRELIKFAFNITIGKIGEGIKKTNLLQEVEKEPRAKMALDTCTKLMDLSIGEFD 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme127101g00001 140 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 140 IPR035513 -
Trme127101g00001 140 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 139 IPR035513 -
Trme127101g00001 140 NCBIfam pectinesterase inhibitor domain 53 139 IPR006501 GO:0004857
Trme127101g00001 140 Pfam Plant invertase/pectin methylesterase inhibitor 59 139 IPR006501 GO:0004857
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme127101g00001 3 139 Carbohydrate Esterase AT3G05610 44.526 1.31e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme127101g00001 K01051 - gmx:100810853 165.622