Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12706g00001 GATTATATACATCGTGTGGGAAGGACTGCTCGGGCAGGGCGTTCTGGGGTAGCCATTTCCCTTGTAAACCAATATGAGCTAGAGTGGTACATTCAGATAGAGAAGCTTATAGGCAAGAAGCTACCAGAGTATCCTGCACAAGAAGAGGAAGTTTTGCTTTTGGAAGAGCGTGTTAGTGAGGCCAAAAGATTAGCTGCAACGGTGTTGCAGCCTATGGCTGCTAGTACAAAATCTCCCATGCTAAAAGGCTTTAACGCCGCTGTGGGAGAAAATTGA 276 0.4638 DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEYPAQEEEVLLLEERVSEAKRLAATVLQPMAASTKSPMLKGFNAAVGEN 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12706g00001 91 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 56 IPR027417 -
Trme12706g00001 91 Gene3D - 1 86 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12706g00001 Trme-Chr12706 261 1271 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12706g00001 2 45 Eukaryotic Initiation Factors Gene Family AT3G19760 40.909 6.91e-06 40.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12706g00001 K14777 - pvu:PHAVU_004G0748001 124.79