Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme126998g00001 GGTGCTGTTGAAAATGTGTTGGATAGAAGCTCTAAAGTTCAGTTGCGTGATGGTTCAATTGTGAAACTGGACAATAATGCTAAGAACCTCATATTGCAAGCTCTTCATGAAATGTCCACAAGTGCATTACGCTGTTTGGGATTTGCCTACAAGGATGAGCTCACTAATTTTGAAGGCTACAATGGTAACGACGACCATCCAGCCCACCAGCTTTTGCTTGACCCTTCCAATTATTCATCAATTGAAAATGAACTCATTTTTGTTGGCTTGGTTGGGTTGAGGGATCCTCCTAGGGAGGAGGTATACCAAGCAATAGAAGACTGCAGAGCAGCTGGAATTCGTGTTATGGTTATAACCGGAGACAACAAAAACACTGCTGAAGCTATATGTCGGGAAATAGGT 402 0.4254 GAVENVLDRSSKVQLRDGSIVKLDNNAKNLILQALHEMSTSALRCLGFAYKDELTNFEGYNGNDDHPAHQLLLDPSNYSSIENELIFVGLVGLRDPPREEVYQAIEDCRAAGIRVMVITGDNKNTAEAICREIG 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme126998g00001 134 SUPERFAMILY HAD-like 86 134 IPR036412 -
Trme126998g00001 134 Pfam haloacid dehalogenase-like hydrolase 88 134 - -
Trme126998g00001 134 Gene3D - 97 134 IPR023214 -
Trme126998g00001 134 Gene3D - 1 96 IPR023299 GO:0000166
Trme126998g00001 134 PRINTS P-type cation-transporting ATPase superfamily signature 89 100 - -
Trme126998g00001 134 PRINTS P-type cation-transporting ATPase superfamily signature 111 121 - -
Trme126998g00001 134 PANTHER CALCIUM-TRANSPORTING ATPASE 1 134 - -
Trme126998g00001 134 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 1 101 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme126998g00001 Trme-Chr126998 99 600 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme126998g00001 1 134 Primary Pumps ATPases(2) AT1G07670 72.388 2.10e-64 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme126998g00001 K01537 - gmx:100812151 248.44