Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12681g00001 GACGAAGGTTTTCATCCCAAGTTATCAGATTTTGGGTTGGCAAAACTTGGTCCAGTTGGTGACAAGACTCATGTATCCACAAGAGTAATGGGAACATATGGCTATTGTGCTCCAGAATATGCTATGACTGGTCAACTAACTCTGAAATCTGACGTCTATAGTTTTGGAGTTGTCTTCCTTGAACTCATTACCGGGCGCAAGGCTATTGATAATACGCGTGGGCATGGAGAGCATAATCTTGTGGCATGGGCACGACCTCTTTTTAAAGACCGCAGGAAGTTTCCGAAAATGGCTGATCCACTACTTCAAGGTAGATATCCAATGCGGGGACTGTACCAAGCACTTGCAGTTGCAGCAATGTGTTTGCAGGAACAAGCTGCTACAAGGCCTCTTATTGGAGATGTTGTGACTGCTCTCACATATCTGGCCTCCCAAACATTCGACCCGAATGCAGGCAATCAGTCTAACAGGGGCGGTTCATCAACCCCTAGGATGAGGGATGACAGAAGGAGCAGCATGGCAGATAGTGTGGATAGTCCCGACCGTGCACGGCTTGGTTCCCCTTCTACCCATAGAAACTCACCTGACTTCAGGAAGAGAGAAGGTAGGGATCCAAGTGAGTTGGGAAGGATCGACACTGGTGGCGGTGGATCAGGGAGAAAATGGGGATTGGATGATTTAGAAAGGCGTGATTCTCAGAGAGATAGCCCTGTAAATACNNNNNNNNNNANNNNNACTCCAAGGAACCGCGACCTGGATAGAGAACGTGCAGTTGCAGAAGCAAGAGTATGGGGTGAGAATTGGAGAGAGAAGAAAAGAGCAAATGCAATGGGAAGCTTTGATGGTACAAATGAATGA 858 0.4662 DEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRGHGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTFDPNAGNQSNRGGSSTPRMRDDRRSSMADSVDSPDRARLGSPSTHRNSPDFRKREGRDPSELGRIDTGGGGSGRKWGLDDLERRDSQRDSPVNTXXXXXTPRNRDLDRERAVAEARVWGENWREKKRANAMGSFDGTNE 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12681g00001 285 Pfam Protein kinase domain 5 79 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme12681g00001 285 MobiDBLite consensus disorder prediction 146 161 - -
Trme12681g00001 285 MobiDBLite consensus disorder prediction 162 177 - -
Trme12681g00001 285 SUPERFAMILY Protein kinase-like (PK-like) 1 137 IPR011009 -
Trme12681g00001 285 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme12681g00001 285 PANTHER OS07G0668900 PROTEIN 1 151 - -
Trme12681g00001 285 Gene3D Transferase(Phosphotransferase) domain 1 1 158 - -
Trme12681g00001 285 MobiDBLite consensus disorder prediction 146 254 - -
Trme12681g00001 285 FunFam Serine/threonine-protein kinase PBS1 1 157 - -
Trme12681g00001 285 MobiDBLite consensus disorder prediction 193 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12681g00001 Trme-Chr12681 1 1164 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12681g00001 1 184 Glycoside Hydrolase AT3G07070 58.511 4.37e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Trme12681g00001 Pkinase 1.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12681g00001 - - gmx:100814575 492.656