Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme126769g00001 ATGAAGTGTTTGATTAGTATTGATTTCACTGACTGTATATTTATAAGAGAAGTACCTGATATGTCTGGCATCCTAAAGTTGAGGACATTGTATCTTGATAATTGCATAAATGTAACTAAAATTCATGATTCTATTGGATTTCTTGATAACCTTGAAGAGCTGACAGCCACAGGATGCACCAATCTATCAACAGTCCCCATCGCTTTCAATTTGCCATCTCGTAGAGTTCTCTCTTTCTCCGAGTGCTCGAAACTCGTGAGGTTCCCAGAAATATTGTGCGAGATCGAAAATTTGCGGCACGTCAATTTGTGGCAAACTGCCATCGAGGAATTACCATTTTCAATTGGAAATGTGACAGGACTTGTAGTT 369 0.3875 MKCLISIDFTDCIFIREVPDMSGILKLRTLYLDNCINVTKIHDSIGFLDNLEELTATGCTNLSTVPIAFNLPSRRVLSFSECSKLVRFPEILCEIENLRHVNLWQTAIEELPFSIGNVTGLVV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme126769g00001 123 SUPERFAMILY L domain-like 2 121 - -
Trme126769g00001 123 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 2 111 - -
Trme126769g00001 123 Pfam Leucine Rich Repeat 26 47 IPR001611 GO:0005515
Trme126769g00001 123 Gene3D Ribonuclease Inhibitor 1 68 IPR032675 -
Trme126769g00001 123 Gene3D Ribonuclease Inhibitor 69 123 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme126769g00001 Trme-Chr126769 1 369 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme126769g00001 15 121 WRKY Transcription Factor Family AT4G12020 33.645 3.77e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme126769g00001 - - vvo:131659751 209.534