Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12661g00001 TACAACCCTGGTGTGGATTTCAGCCAAGGGCATGGTCTTGTTTTTATTCCAGGGAAAGATGAAAATGGAGTTTATGTTCCCTTGCCCCCTAGAAAAGCAGGTCATTTAGCTAGAAGTTTAGTTACTGCTGGAATATCTATCGGAGGAATATGCGTGGTTCTGTTGTTATCAATTTGTATATATATTAGATATTATCGAAAGAAGAATCGACAGGAGTTTAAATTCCCACCAAAAGATTCTATGACACCTTCTATTAAAGATGTTGATAAAGATACCAATGGTGATACTGGATCCAAATATATTTTTATGGACAAATCACCGGAATTTTCATACGAAGAACTAGCCAATGCTACTGATAACTTCAGTTTGGCTAATAAAATTGGTCAAGGTGGTTTTGGTGAAGTCTACTATGGAGAGCTAAGAGGCCAGAAAATTGCAATCAAGAAGATGAAGATGCAAGCAACAAAAGAATTTCTTTCTGAACTGAAAGTCTTAACAAGTGTTCATCACCGGAACCTGGTACACTTGGTAGGATATTGTGTCAAGGGATATCTATTCCTTGTCTACGAATACATGGAAAATGGAAACTTAAGCCAAAATCTACATAACTCAGGTCATATATAA 624 0.3654 YNPGVDFSQGHGLVFIPGKDENGVYVPLPPRKAGHLARSLVTAGISIGGICVVLLLSICIYIRYYRKKNRQEFKFPPKDSMTPSIKDVDKDTNGDTGSKYIFMDKSPEFSYEELANATDNFSLANKIGQGGFGEVYYGELRGQKIAIKKMKMQATKEFLSELKVLTSVHHRNLVHLVGYCVKGYLFLVYEYMENGNLSQNLHNSGHI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12661g00001 207 Gene3D Phosphorylase Kinase; domain 1 90 191 - -
Trme12661g00001 207 ProSiteProfiles Protein kinase domain profile. 121 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme12661g00001 207 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 206 IPR044812 GO:0019199|GO:0045087
Trme12661g00001 207 Pfam Protein tyrosine and serine/threonine kinase 123 204 IPR001245 GO:0004672|GO:0006468
Trme12661g00001 207 FunFam LysM receptor kinase 2 100 191 - -
Trme12661g00001 207 SUPERFAMILY Protein kinase-like (PK-like) 95 205 IPR011009 -
Trme12661g00001 207 ProSitePatterns Protein kinases ATP-binding region signature. 127 149 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12661g00001 Trme-Chr12661 2 1438 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12661g00001 1 206 Receptor kinase-like Gene Family AT3G21630 50.226 2.24e-63 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trme12661g00001 PK_Tyr_Ser-Thr 1.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12661g00001 K13429 - qsa:O6P43_020813 243.817