Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme126601g00001 CCGACCACCGGCAACAACGATGACGCCGAATACATCCGTTCAAGTTGCAACACAACACTATACCCTGACATATGCTACACTTCCCTCTCTCGTTACGCCAATGCAGTTCAACAGAATCCAGGCCAGCTCGCTCGCATCGCCATAGCCGTAAGTTTCTCCAAGGTTCACCGTACCGCATCCTATCTCTCAAATCTCACTCGTGTCGCCGATTACAGCGGTAACTCACGCGCYGCACTCGCTCTCCRTGACTGTTTCTCAAATCTCGACGATGCCGTTGATGAAATCCGTGGCTCGCTTAAACAGATGCGTCAGTTAGGAGCCGCCGGAAGTGGAACCGATTCGTTTCTTTTTCAGATGAGTAACGTTCAGACGTGGATGAGTGCGGCGCTTACCGATGAAGAAACGTGTACGGATGGATTTCAAGATGTAGAGGATTGTCCGATGAAATCGGATGTAGAGAAACGTGTGACGAAGGTTAAGAAGTTCACGAGTAATGCTTTGGCACTTGTTAATGGTTACGCCAAAAAAGGAATGCCGTGA 540 0.4926 PTTGNNDDAEYIRSSCNTTLYPDICYTSLSRYANAVQQNPGQLARIAIAVSFSKVHRTASYLSNLTRVADYSGNSRAALALXDCFSNLDDAVDEIRGSLKQMRQLGAAGSGTDSFLFQMSNVQTWMSAALTDEETCTDGFQDVEDCPMKSDVEKRVTKVKKFTSNALALVNGYAKKGMP 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme126601g00001 179 NCBIfam pectinesterase inhibitor domain 5 173 IPR006501 GO:0004857
Trme126601g00001 179 Pfam Plant invertase/pectin methylesterase inhibitor 11 169 IPR006501 GO:0004857
Trme126601g00001 179 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 169 - -
Trme126601g00001 179 Gene3D Invertase/pectin methylesterase inhibitor family protein 7 173 IPR035513 -
Trme126601g00001 179 FunFam Pectin methylesterase inhibitor 1 7 173 - -
Trme126601g00001 179 CDD PMEI-like_3 14 175 - -
Trme126601g00001 179 SMART PMEI_2 7 169 IPR006501 GO:0004857
Trme126601g00001 179 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 10 171 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme126601g00001 Trme-Chr126601 1 540 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme126601g00001 12 179 Carbohydrate Esterase AT5G53370 29.070 2.81e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme126601g00001 - - cam:101503417 312.383