Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12659g00001 ATGAAGGAAGTTAATCCTCGCCTAACAGACTACGAAACGTTGCTCAGAAACGTACATGATTTAAAGGCAGGAAAGCCAGTTGAAGTTCCTGTGTATGATTTCAAATCCAGTTCACGTACAGGATACAGGACGGTTGAAGTTCCGAGCTCTCGCATTGTGATTATAGAGGGCATTTATGCTTTGAGTGAGAGATTGCGACCTCTACTAGACCTTCGAGTATCTGTAACAGGTGGTGTTCATCTTGACCTTGTTAAACGAGTTATACGTGATATACAACGTGCTGGTCAAGAACCTCAAGAAATTATTCATCAAATATCTGAGACGGTATATCCAATGTACAAGGCTTATATTGAGCCAGATCTCCAAACAGCACACGTAAAAATAACTAACAAGTTTAATCCATTTTTTGGATTCCAAAGCCCTACTTACATATTAAAGTCAACCAGGAATGTAACGGCGGATCAAATTAAAGCTGTTATCTCCCAAGATTTTGAGGAAACAACTGAGCAAACTTATGACATTTATCTTCTACCACCCGGTGAAGATCCGGAGAGCTGTCAATCATATTTACGGATGCGAAATAAGGATGGAAAATACAGTCTCATGTTTGAGGAATGGGTGACTGATGATCCGTTTGTCATATCACCAAGAATTACTTTCGCGGTCAGTGTGCGTCTTCTTGGTGGACTAATGGCCCTTGGATACACAATAGCAACTATCCTAAAAAGAAGCAGTCATGTCTTATCTGATGATAGGGTTTGTGTTAAACTTGATTGGCTTGAGCAACTAAATCGACATTATGTTCAG 807 0.4002 MKEVNPRLTDYETLLRNVHDLKAGKPVEVPVYDFKSSSRTGYRTVEVPSSRIVIIEGIYALSERLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPQEIIHQISETVYPMYKAYIEPDLQTAHVKITNKFNPFFGFQSPTYILKSTRNVTADQIKAVISQDFEETTEQTYDIYLLPPGEDPESCQSYLRMRNKDGKYSLMFEEWVTDDPFVISPRITFAVSVRLLGGLMALGYTIATILKRSSHVLSDDRVCVKLDWLEQLNRHYVQ 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12659g00001 269 ProSiteProfiles CYTH domain profile. 140 269 IPR023577 -
Trme12659g00001 269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 130 IPR027417 -
Trme12659g00001 269 PANTHER URIDINE KINASE 5 171 - -
Trme12659g00001 269 Pfam CYTH domain 161 268 IPR023577 -
Trme12659g00001 269 Gene3D - 3 172 IPR027417 -
Trme12659g00001 269 SUPERFAMILY CYTH-like phosphatases 158 267 IPR033469 -
Trme12659g00001 269 CDD UMPK_like 6 131 - -
Trme12659g00001 269 Pfam Phosphoribulokinase / Uridine kinase family 5 128 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12659g00001 Trme-Chr12659 56 1511 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12659g00001 5 128 PRT Gene Family AT5G40870 30.400 4.38e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12659g00001 K00876 - gmx:100781286 492.271