Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme126327g00001 ATGGGTGTGCCAAATTTGGAGACTTCATGTTTGTTTAATGCTTTTATTTCCTCTATGCAGGCTTCTGAGTTGCAGTTTGAGTTCCTTGGCTGTTACCTTGCTGAGCTCAGTTTGTTGGATTATCATTGTGTGAAGTTCTTGCCTTCTATGGTGGCTGCATCAGTTGTATTTCTTGCGCGTTTTATGTTAAGCCCGAAGACTCATCCTTGGAATTTAGCCATCTATCAACTCACCAGATATAAACCAGCTGAATTGAAGGAATGTGTTCTAACCATACATGACTTGTACCTCGGTAGGAAAGGGGGCTCTTTGCAAGCCGTGAGAGATAAATACAAACAACACAAG 345 0.4174 MGVPNLETSCLFNAFISSMQASELQFEFLGCYLAELSLLDYHCVKFLPSMVAASVVFLARFMLSPKTHPWNLAIYQLTRYKPAELKECVLTIHDLYLGRKGGSLQAVRDKYKQHK 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme126327g00001 115 SMART Cyclin_C_2 7 115 IPR004367 -
Trme126327g00001 115 Pfam Cyclin, C-terminal domain 15 115 IPR004367 -
Trme126327g00001 115 FunFam Cyclin A1 3 115 - -
Trme126327g00001 115 SUPERFAMILY Cyclin-like 9 115 IPR036915 -
Trme126327g00001 115 SMART cyclin_7 10 94 IPR013763 -
Trme126327g00001 115 Gene3D - 3 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme126327g00001 Trme-Chr126327 111 536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme126327g00001 1 115 Core Cell Cycle Gene Families AT5G43080 56.522 3.99e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme126327g00001 K06627 - gmx:100791691 169.859