Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme126192g00001 ATGTATTTCTTATCAAACCTTGATCAAAACATTGCTGTAATTGTTAGAACTGTTTATTGTTTCAAAAATCAAGAGAAAGGAAATGAGAATGCTAATGAAGTGATTAAGAATGCATTAAAGGATGTTCTTGTTCATTATTATCCTCTTGCTGGGAGATTAAGTATAAGCTCAGAAGGTAAACTTATTGTAGATTGTACAGGAGAAGGTGCTCTTTTTGTTGAAGCTGAAGCTAATTGTTTAATGGAAGAAATTGGTGATATTACAAAACCTGATCCAAGGACTCTTGGTATGTTGGTTTATGATATTCCTGATGCTAAACATATTCTTCAGATGCCTCCTTTGGTTGCTCAGCCCCTTTTGCAATAG 366 0.3388 MYFLSNLDQNIAVIVRTVYCFKNQEKGNENANEVIKNALKDVLVHYYPLAGRLSISSEGKLIVDCTGEGALFVEAEANCLMEEIGDITKPDPRTLGMLVYDIPDAKHILQMPPLVAQPLLQ 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme126192g00001 121 Gene3D - 1 119 IPR023213 -
Trme126192g00001 121 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 117 - -
Trme126192g00001 121 Pfam Transferase family 3 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme126192g00001 Trme-Chr126192 49 531 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme126192g00001 17 117 Monolignol Biosynthesis Gene Families AT5G48930 32.673 6.38e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme126192g00001 K15400 - gmx:100792433 213.772