Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme126131g00001 GTTCAAGCACATTTCGGTTTCGGTCCTCTATGTGCTTATCTATCCATTAATTATATGGACCGTTTCCTTGTTGCATATGAATTACCGAAGGGAAGGGCTTGGACAATGCAATTGTTGGCGATAGGCTGCATATCTTTGGCAGTGAAAGTAGAGGAGACATGTGTTCCTATGACTCTTGATTTGCAGGTAGGAATTAGGAACTTATTGGTTTCAATGCTTAGTGTTTGTTAA 231 0.4026 VQAHFGFGPLCAYLSINYMDRFLVAYELPKGRAWTMQLLAIGCISLAVKVEETCVPMTLDLQVGIRNLLVSMLSVC 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme126131g00001 76 SMART cyclin_7 1 74 IPR013763 -
Trme126131g00001 76 Gene3D - 1 72 - -
Trme126131g00001 76 Pfam Cyclin, N-terminal domain 1 65 IPR006671 -
Trme126131g00001 76 SUPERFAMILY Cyclin-like 1 66 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme126131g00001 Trme-Chr126131 208 530 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme126131g00001 7 64 Core Cell Cycle Gene Families AT5G65420 62.069 2.56e-23 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme126131g00001 K18810 - gmx:100803873 114.39