Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12609g00001 GCATATGTGCAGCAATTGGAGAACAGTCGACTTAGGCTTGCTCAAATAGAGCAAGAGCTTCAACAAGTACATCAGCAGGGTGTGTTTGTTGCAAATGGAGTTGCAGCGGATCGTGGCCATTCAGTTGTTGGCAACGGTGCATTAGCATTCGATATGGACTATGTCCGTTGGGTTGACGAACATCAACGATTAATCAATGACATAAGATTAGCTATAAATTCACAAATCGGYGATAATGAACTGCATCTTCTYGTTGATGGTGTCATGACACATTATGATGAGTTATACAAGTTGAAGAGTATAGGTGCAAAGGCTGATGTATTTCACATACTTTCTGGGTTGTGGATAACACCTGCAGAAAGATGTTTCATGTGGCTCGGTGGATTCCGTTCATCTGAACTTCTCAAGGTAGTGGCCTGTGGAGACAAATCATGGACCGAGTATCTTTCGGTGGCTCATAACTTGGCCAACATTAGACTTAAGTTTTTTAGGACTAGTCCAAT 503 0.4215 AYVQQLENSRLRLAQIEQELQQVHQQGVFVANGVAADRGHSVVGNGALAFDMDYVRWVDEHQRLINDIRLAINSQIGDNELHLLVDGVMTHYDELYKLKSIGAKADVFHILSGLWITPAERCFMWLGGFRSSELLKVVACGDKSWTEYLSVAHNLANIRLKFFRTSP 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12609g00001 167 Pfam Seed dormancy control 65 138 IPR025422 GO:0006351|GO:0043565
Trme12609g00001 167 ProSiteProfiles DOG1 domain profile. 47 167 IPR025422 GO:0006351|GO:0043565
Trme12609g00001 167 Coils Coil 6 26 - -
Trme12609g00001 167 PANTHER TRANSCRIPTION FACTOR TGA9 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12609g00001 Trme-Chr12609 54 1159 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12609g00001 1 139 bZIP Transcription Factor Family AT1G68640 64.029 1.52e-65 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12609g00001 K14431 - gmx:100775280 227.639