Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme126039g00001 ATGCCTCACAATGTATTTCTGCATTCTGCTTTAGTGCAGTCAAGGAAGATTGATCCGAATAAGAAAGGCCGGGTGCAAGAGGCTCTTAATTACTATAATATTGAGTCAACAGTTGCACTTTCAGTCACCTTCATGATCAATCTGTTTGTCACAACAGTTTTTGCTAAGGGTTTTTATGGTACAGAGCAGGCAAATAGCATAGGATTGGTAAATGCAGGGCAGTATCTTGAGGAAAAATATGGAGGTGGACTCTTCCCTATTCTTTATATATGGGGGATCGGGTTATTGGCAGCTGGACAAAGTAGCACTATCACTGGCACGTATGCTGGGCAATTCATAATGGGGGGTTTCCTCAACCTTCGATTAAAAAAATGGTTGAGAGCATTGATCACTCGGAGTTGTGCAATTGTGCCAACTATAATTGTAGCTATTGTTTATAACAGCTCAGAAGGCTCATTGGATGTTTTGAATGAATGGCTTAATGTGCTTCAGTCCGTACAAATTCCCTTTGCATTGATTCCCCTCCTCACGTTGGTCTCCAAAGAGCGTATCATGGGGTCCTTTAAGGTTGGGCCTGTTCTTGAGGTGAGTTGA 594 0.4226 MPHNVFLHSALVQSRKIDPNKKGRVQEALNYYNIESTVALSVTFMINLFVTTVFAKGFYGTEQANSIGLVNAGQYLEEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSCAIVPTIIVAIVYNSSEGSLDVLNEWLNVLQSVQIPFALIPLLTLVSKERIMGSFKVGPVLEVS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme126039g00001 197 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 196 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme126039g00001 197 Pfam Natural resistance-associated macrophage protein 1 191 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme126039g00001 197 PRINTS Natural resistance-associated macrophage protein signature 127 144 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme126039g00001 197 PRINTS Natural resistance-associated macrophage protein signature 161 180 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme126039g00001 197 PRINTS Natural resistance-associated macrophage protein signature 99 118 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme126039g00001 Trme-Chr126039 1 594 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme126039g00001 1 195 Inorganic Solute Cotransporters AT1G47240 87.179 1.01e-123 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme126039g00001 K21398 - thj:104820503 360.147