Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme125863g00001 ATTATAGGAGCTAATCTTAACAAAGGAGGACCAAGAATTCCTTGGCATGATTCTCATGCTTGTGTTATTGGCGAAGCGGCTTGTGATGTGTTAACAAATTTTGAGCAAAGATGGACAAAACAATGTGATCCTTCTCTTTTAGTCCCTTCTAGCGCTTTGGTGAATCTTGCTCCTCAAGCAAACTCAAACACTTCAATAGAAAATAATAATTGGAAAGTTCAAGTTTATAGGTCAATTGATCATGCTTCTGTTGATGATTTGTGTGGAAATTTCAACGTCGAGAGAAGCATCCATGAAGCTTATGTTGAAGCAATTAGACATGCTGAGAAGTTTATATACATTGAAAACCAATACTTTATTGGAGGATGTCAATGGTGGGAAAAAGATAAGAATGTTGGTTGCACAAATTTGATTCCTATTGAAATTGCATTAAAAGTGGTTGATTGGTGA 450 0.3578 IIGANLNKGGPRIPWHDSHACVIGEAACDVLTNFEQRWTKQCDPSLLVPSSALVNLAPQANSNTSIENNNWKVQVYRSIDHASVDDLCGNFNVERSIHEAYVEAIRHAEKFIYIENQYFIGGCQWWEKDKNVGCTNLIPIEIALKVVDW 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme125863g00001 149 Gene3D Endonuclease Chain A 32 148 - -
Trme125863g00001 149 SUPERFAMILY Phospholipase D/nuclease 3 50 - -
Trme125863g00001 149 PANTHER PHOSPHOLIPASE D 7 147 IPR015679 -
Trme125863g00001 149 SUPERFAMILY Phospholipase D/nuclease 73 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme125863g00001 Trme-Chr125863 2 585 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme125863g00001 1 146 Phospholipase D Gene Family (Wang group) AT1G55180 56.376 1.96e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme125863g00001 K01115 - gmx:100812642 242.276