Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme125796g00001 AAGTTACCTGATACAGTTTTTACTAAATCTAGCATAATATCAAAGGATGAACCTCTTCAAATTGCTCTAGTTGATGTTGGATCTAAGTCAATAGTCAATGAAGGTTCCTTCTCTTCAATAAAGATAGAGATTTGTGCACTTGATGGTGAATTTGGATCTTGTGGCAGTGAGGATTGGACTGAAACTCAATTCAATGATAATATCTTGCGCGAAAGAGATGGCAAAGAGCCACTATTGGTTGGGAATCACAAGATTATTACTCTTGAAAATGGAGTTGCTTCCGTCTCTAAAATTATGTTTACTGATAATTCAAGATGGTTAAGAGGCAAAAAGTTCAGGTTAGGAGTTAAAGCTATGCAAAATGGAGAAAAGATTAAGGAAGGTAGAAGTCAACCTTTTCGGGTCAAAGATAACAGAGGAGAATCCTACCAGAAACATTACCCTCCACACTTGAATGATGATGTTTGGCGTTTGAAGAAAATTGCTAAAGATGGAATATTCCACAAGCGGCT 512 0.3672 KLPDTVFTKSSIISKDEPLQIALVDVGSKSIVNEGSFSSIKIEICALDGEFGSCGSEDWTETQFNDNILRERDGKEPLLVGNHKIITLENGVASVSKIMFTDNSRWLRGKKFRLGVKAMQNGEKIKEGRSQPFRVKDNRGESYQKHYPPHLNDDVWRLKKIAKDGIFHKRL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme125796g00001 171 Pfam Calmodulin binding protein-like N-terminal domain 2 138 IPR046831 -
Trme125796g00001 171 Pfam Calmodulin binding protein central domain 151 171 IPR046830 -
Trme125796g00001 171 PANTHER OS02G0177800 PROTEIN 1 171 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme125796g00001 Trme-Chr125796 2 609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme125796g00001 19 171 Calmodulin-binding Proteins AT4G25800 46.154 9.65e-47 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme125796g00001 - - lja:Lj1g3v4777410.1 247.669