Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme125481g00001 ATGGAGGTGTTTGGGATAAAGGGTTTTNTCATCTTTGTTTTCTGTTTGTGGATTCCAAATGAAGTTATGGCAGCCACCATTGGAAACTCTAGTGTTTCTTCTAGACCTAGTGTTTTGAAAATTGGAGCATTGTTTACTGTTGATTCTGTGATTGGAAGATCAGCTAAACCAGGAATCATGGCTGCAATTGAAGATGTTAATGCTAATAAGAGCATTCTTCCTGGTGTTAAACTTGAAGTTATTTTACATGATACAAATTGCAGTGGATTTCTTGGAACAGTGGAAGGTATTTGCCAAAAACTTTCATTTCAGTACCTATAA 321 0.3583 MEVFGIKGFXIFVFCLWIPNEVMAATIGNSSVSSRPSVLKIGALFTVDSVIGRSAKPGIMAAIEDVNANKSILPGVKLEVILHDTNCSGFLGTVEGICQKLSFQYL 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme125481g00001 106 Gene3D - 36 97 - -
Trme125481g00001 106 SUPERFAMILY Periplasmic binding protein-like I 34 98 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme125481g00001 Trme-Chr125481 188 508 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme125481g00001 32 94 Ion Channels AT1G05200 57.143 1.84e-21 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme125481g00001 K05387 - qsa:O6P43_000581 121.709