Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme125448g00001 ATGGAACTGAAGATTTTGATGATAGATGAAAATGTACAAAGGGAAATTATAAACCATAGATCCCTGAGGCATCCAAATATTGTCAGATTCAAGGAGGTCATACTTACCCCAACACATTTAGCTATTGTGATGGAATATGCTTCCGGAGGAGAGCTATTTGAGCGAATATGCAATGCAGGACGGTTCAGCGAGGATGAG 198 0.404 MELKILMIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme125448g00001 66 SUPERFAMILY Protein kinase-like (PK-like) 10 65 IPR011009 -
Trme125448g00001 66 ProSiteProfiles Protein kinase domain profile. 1 66 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme125448g00001 66 PANTHER SERINE/THREONINE KINASE 3 66 - -
Trme125448g00001 66 Pfam Protein kinase domain 9 66 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme125448g00001 66 Gene3D Phosphorylase Kinase; domain 1 2 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme125448g00001 Trme-Chr125448 10 447 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme125448g00001 3 66 CBL-interacting serine-threonine protein kinases AT5G35410 48.438 1.75e-14 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Trme125448g00001 Pkinase 6.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme125448g00001 K14498 - msin:131229739 122.094