Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme125317g00001 TATAGACAATACGGGATATGGAGTCGTTACACCGATTTATATCCAAAAAATGATCTTGTTTACACGGTTGGTGTTAGTGACTGGAAAAAGGATTGGTTTTTTGCTCATGTTCCAAGGATCATAGGAAATAAAACATTCCAAGCAACCACATGGAGTGTTGTATTTAAACTTGAAAGTGTAGTGCCCGGAAACTATACATTACAATTGGCCCTTGCTAGTGCCTCTAATGCTGAAGTGCAGGTACACTAA 249 0.3855 YRQYGIWSRYTDLYPKNDLVYTVGVSDWKKDWFFAHVPRIIGNKTFQATTWSVVFKLESVVPGNYTLQLALASASNAEVQVH 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme125317g00001 82 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 81 - -
Trme125317g00001 82 Pfam Polysaccharide lyase family 4, domain III 11 81 IPR029411 -
Trme125317g00001 82 SUPERFAMILY Galactose-binding domain-like 18 81 IPR008979 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme125317g00001 1 82 Polysaccharide Lyase AT4G24430 60.241 1.80e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme125317g00001 K18195 - han:110878710 129.798