Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1252124g00001 ATGGTACTAGTGGACCACCCTAACGTGTTGAAATCACACTGTTCATTCGTTAGCGATCACAATCTATGGGTTGTGATGCCATTCATGTCTGGTGGTTCATGTCTTCACATATTGAAAGCTGCACATCCTGATGGATTTGAAGAG 144 0.4306 MVLVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAHPDGFEE 48
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1252124g00001 48 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Trme1252124g00001 48 SUPERFAMILY Protein kinase-like (PK-like) 2 42 IPR011009 -
Trme1252124g00001 48 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 48 IPR047173 GO:0043539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1252124g00001 Trme-Chr1252124 12 155 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1252124g00001 1 48 MAP Kinase Kinase Kinase Kinase AT1G79640 91.667 2.84e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1252124g00001 K08835 - gmx:100780339 107.071