Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme125110g00001 ATGTTTGATGTGCTTGACGTCAATGTTGCTCGTGAAGATCCAATGAGGTTGATGTTTGAGAAAGANNNNNNNNNNTNNNNNNNNNNGAACACTATAGCTTGTGAGGGTTCTGAGAGGGTTGAGAGGCCAGAGACATACAAGCAATGGCAGTTTCGGAACATAAGGGCTGGATTTAGGCAACTTCCCTTGGATAAACATCTCATTAACAAGTTAAGATGCAAGTTGAAAGATGTGTATCATAGTGATTTCATGCTTGTTGAAGATGGCAACTGCATGCTGCAAG 283 0.3887 MFDVLDVNVAREDPMRLMFEKXXXXXXXXNTIACEGSERVERPETYKQWQFRNIRAGFRQLPLDKHLINKLRCKLKDVYHSDFMLVEDGNCMLQ 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme125110g00001 94 ProSiteProfiles GRAS family profile. 1 94 IPR005202 -
Trme125110g00001 94 Pfam GRAS domain family 1 93 IPR005202 -
Trme125110g00001 94 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 80 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme125110g00001 Trme-Chr125110 74 356 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme125110g00001 1 94 GRAS Transcription Factor Family AT1G07530 55.319 1.04e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme125110g00001 GRAS 1.7e-16 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme125110g00001 - - gmx:100815586 158.303