Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme125109g00001 GAAGAAAACGGTGAAGAGCTTCTTGCTGATGCTCATCTTGTTGCAGCTACAATGGTGGGTCAAAATGCTGGTGATAAGATTAAAGAGTATATAAAATCGAGTCAAAATCCAACCGCTACGATCAAGTTTAAAGGGACTGTAATCGGCGGTTCGGATTCACCTTCTGCTCCTCAAGTTGCTTCCTTTTCTAGCAGAGGTCCTAATTATAGAACTTCAGAGATTCTTAAACCAGATGTTATTGCTCCTGGTGTTAACATTTTAGCAGGTTGGACTGGTAAAGTGGGTCCAACTGATTTGGAAATTGATCCTAGGAGAGTTGAGTTTAACATAATTTCAGGTACTTCTATGTCGTGTCCTCATGTTAGTGGAATTGCTGCATTGCTTAGAAAAGCTTTTCCAAATTTTTCACCAGCTGCAATTAAATCTGCTTTGATGACAACTGCTTATAATGTTGATAACTCTGGTGGAAAAATTAAGGATCTTGGAACAGGTAAAGAGTCAAATCCATTTGTTCATGGAGCAGGACATGTTGATCCTAATAAAGCACTTAATCCCG 556 0.3921 EENGEELLADAHLVAATMVGQNAGDKIKEYIKSSQNPTATIKFKGTVIGGSDSPSAPQVASFSSRGPNYRTSEILKPDVIAPGVNILAGWTGKVGPTDLEIDPRRVEFNIISGTSMSCPHVSGIAALLRKAFPNFSPAAIKSALMTTAYNVDNSGGKIKDLGTGKESNPFVHGAGHVDPNKALNP 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme125109g00001 185 ProSiteProfiles Serine proteases, subtilase domain profile. 1 183 - -
Trme125109g00001 185 Gene3D - 5 48 - -
Trme125109g00001 185 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 185 IPR045051 -
Trme125109g00001 185 Pfam Subtilase family 46 159 IPR000209 GO:0006508|GO:0008236
Trme125109g00001 185 SUPERFAMILY Subtilisin-like 47 184 IPR036852 GO:0004252|GO:0006508
Trme125109g00001 185 CDD PA_subtilisin_like 1 41 - -
Trme125109g00001 185 ProSitePatterns Serine proteases, subtilase family, serine active site. 113 123 IPR023828 -
Trme125109g00001 185 Gene3D Peptidase S8/S53 domain 49 185 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme125109g00001 Trme-Chr125109 1 556 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme125109g00001 2 185 Subtilisin-like Serine Gene Family AT3G14067 76.087 2.27e-93 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme125109g00001 - - tpra:123883043 357.836