Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme125091g00001 ATGTTCCATCCTCGTTTGCAAGAAAAAATATTGAAAGTGGTTGATGTTTCCTATGGTGGGGAAAATGGCTTTAACCAAGCTATTGGATTATCTGCGGAGATTTTATCTGATGTGAAGTTCGTACAAGAGAAACGCTTGATAGGAAAATATTTCGAAGAGATAAGACAAGAAACCGGGAAATATGTTTACGGAGTTGATGACACATTGAAGGCACTAGAGATTGGTGCTGTTGAAACACTCATTGTATGGGAGGATTTGGATATTAATAGGTATGTGCTGAAAAACGCTACCACCGGTGAGATTGTAATAAAGCATTTGAAGAAGGAACAAGAATGTGACGAAAGCAACTTCCGCGATGCGGCTACCTCTGCAGACTTGAAGGTTCAAGAGAAGATAGCATTACTTGAGTGGTTTGCGAATGAGTATAAAAAAATGGGATGCTTGCTGGAATTTGTGACCAATAAATCTCAAGAAGGGTCAATATTTTGTAGAGGCTTTGGTGGTATTGGAG 511 0.3933 MFHPRLQEKILKVVDVSYGGENGFNQAIGLSAEILSDVKFVQEKRLIGKYFEEIRQETGKYVYGVDDTLKALEIGAVETLIVWEDLDINRYVLKNATTGEIVIKHLKKEQECDESNFRDAATSADLKVQEKIALLEWFANEYKKMGCLLEFVTNKSQEGSIFCRGFGGIG 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme125091g00001 170 Pfam eRF1 domain 3 40 170 IPR005142 -
Trme125091g00001 170 FunFam Peptide chain release factor subunit 1 38 170 - -
Trme125091g00001 170 Gene3D eRF1 domain 2 1 37 IPR042226 -
Trme125091g00001 170 SUPERFAMILY L30e-like 37 170 IPR029064 -
Trme125091g00001 170 Gene3D - 38 170 IPR029064 -
Trme125091g00001 170 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 1 170 IPR004403 GO:0003747|GO:0006415
Trme125091g00001 170 SUPERFAMILY Translational machinery components 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme125091g00001 Trme-Chr125091 22 532 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme125091g00001 1 170 Eukaryotic Initiation Factors Gene Family AT3G26618 81.176 5.39e-98 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme125091g00001 K03265 - egr:104419069 300.441