Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme124945g00001 ATGCTACAAACACTTCCTATAATTGTTACTTATTTTGTTCTTTCCTCCTTTTGTTTCAAACAGGATAAGGCAGCTTTCATATTTTGTGTTGAAGACAGAGCACTCTTCTGTGAGGATTGTGATGATTCTATTCACTTAGCYGGTAGTCTTTCCGCAAACCACCAGCGCTTCCTTGCTACCGGTATCCGAGTGGCCATGAGTTCTAGTTGCGCCAAAGACGACGACAAAACTCACATGGAGCCACCTAATAGAAAGAACACAGAACAAGTTTCCCTTGAAACACCTTCTCAGCAAGTACCTGACTTTACACCCTCTTGGGGTGTTGATGACTTATTGGAGTTAGCAGATTTTGATTCCCATGACAAA 366 0.4208 MLQTLPIIVTYFVLSSFCFKQDKAAFIFCVEDRALFCEDCDDSIHLAGSLSANHQRFLATGIRVAMSSSCAKDDDKTHMEPPNRKNTEQVSLETPSQQVPDFTPSWGVDDLLELADFDSHDK 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme124945g00001 122 SMART bboxneu5 13 59 IPR000315 GO:0008270
Trme124945g00001 122 CDD Bbox1_BBX-like 21 58 - -
Trme124945g00001 122 PANTHER B-BOX ZINC FINGER PROTEIN 22 21 115 - -
Trme124945g00001 122 MobiDBLite consensus disorder prediction 70 105 - -
Trme124945g00001 122 MobiDBLite consensus disorder prediction 84 103 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme124945g00001 21 122 Orphan Transcription Factor Family AT1G06040 50.450 2.08e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme124945g00001 - - gmx:100814727 155.606