Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme124917g00001 CGAGGGCATAACCAAAATCCACCAACGGGGTCTGTTGGTAGCGCAGATCGATGGCCATTTGAATTTATCAATGGGGAACCTTTGTCAGTCGTTAGATCAGTTGGGGGAATGCAAGCCACTGGTCAACCTGCTGGAGCTCAGCTTGGCCAGCAGCAACAGCATAACCAAAACCCGTTCGTTGGTAGCATCAATAATTGGCCATTCGGATATATGGCGTTTCAACCAAACCATATAATGACTGGGGCCCCAGGACCAGTTGTTACATCACTTGGTGGCATGCAATCCACTGGTCAACCTGCTGGAACTCAGCTGGGTCAGCATCAACTTGCTTATCAGCAGCAACTTCAGCAACAACTGCAAGGCTTCTGGGCATACCAAATGACYGGGGYCCCAGGATCAGCTGYTACATCAGTCRGGGGCATGCAGTCCACTAGWCAACTTGTTGGGGCTCAGCTGGGTCAACATCAACTTGCTTATCAGCATATTCAGCAGCAGCAACAACTGCAAGCCTTTTGGGCAAACCAGTACCAAGAAGTAAAAAAGGTTTCTGATTTCAAGAAGCACTGCCTTCCCTTGGCAAGGATCAAGAAGATTATGAAGGCTGATGAGG 610 0.4885 RGHNQNPPTGSVGSADRWPFEFINGEPLSVVRSVGGMQATGQPAGAQLGQQQQHNQNPFVGSINNWPFGYMAFQPNHIMTGAPGPVVTSLGGMQSTGQPAGTQLGQHQLAYQQQLQQQLQGFWAYQMTGXPGSAXTSVXGMQSTXQLVGAQLGQHQLAYQHIQQQQQLQAFWANQYQEVKKVSDFKKHCLPLARIKKIMKADE 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme124917g00001 203 Gene3D Histone, subunit A 153 203 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme124917g00001 Trme-Chr124917 3 612 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme124917g00001 168 203 CCAAT-HAP5 Transcription Factor Family AT1G56170 75.000 8.90e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme124917g00001 K08066 - gmx:100785287 96.2857