Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme124870g00001 CTCAAAATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTTTGACCGAGCTGTTCCTCACGGGAACCTTAAAGCTACAAATGTGTTGTTAGATACAGCTGATATGAACGCACGCGTTGCTGATTATTGTCTTCACCGACTTATGACTCAGGCTGGTACTATTGAACAGATTCTTGATGCTGGTGTTTTAGGYTATCGTGCGCCAGAGTTAGCKGCTTCTAAGAAGCCAATGCCTTCCTTCAAGTCAGATGTCTATGCTTTCGGCGTGATACTTTTGGAACTTTTAACCGGAAGGTGTGCTGGTGATGTGATATCTGGTGAAGAGGGCGGTGTTGATCTTACAGATTGGTTAAGATTGCGAGTAGCAGAAGGTCGAGGCTCGGAATGTTTTGATGCTACTTTGATGTCAGAAATGGGAAATCCAGTTGTAGAAAAGGGAATGAAGGAGGTTCTAGGAATAGCAATTCGATGTATCCGATCGGTTTCTGAAAGGCCTGGTATCAAGACTATATATGAAGATCTTTCTTCTATATAA 540 0.4296 LKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTADMNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPMPSFKSDVYAFGVILLELLTGRCAGDVISGEEGGVDLTDWLRLRVAEGRGSECFDATLMSEMGNPVVEKGMKEVLGIAIRCIRSVSERPGIKTIYEDLSSI 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme124870g00001 179 SUPERFAMILY Protein kinase-like (PK-like) 2 176 IPR011009 -
Trme124870g00001 179 FunFam Pollen receptor-like kinase 1 1 179 - -
Trme124870g00001 179 Gene3D Transferase(Phosphotransferase) domain 1 1 179 - -
Trme124870g00001 179 PANTHER OS07G0626500 PROTEIN 1 179 - -
Trme124870g00001 179 Pfam Protein kinase domain 2 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme124870g00001 179 ProSiteProfiles Protein kinase domain profile. 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme124870g00001 Trme-Chr124870 2 541 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme124870g00001 1 179 Receptor kinase-like Gene Family AT3G51740 41.667 7.45e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trme124870g00001 Pkinase 2.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme124870g00001 - - gmx:100795611 340.502