Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12485g00001 ATGTTTCTCTTAACAGATGATACAGCAATGCTTTGGGGCGTTAAATTCTACAACGATTTCCTCATGCAAGCTGGTCCTAATGGTAATGTGCAATCCGAGCTACTTTTCCGAAAAGATGATTCTTTTATGTTCGACAAGGGTTGGGGGTTTCCTCGGAGGATCTATTTCAATGGTGATAACTGTGTGATGCCACCACCTGATGCTTATCCATGGTTACCCAATGCTGGTTTGAAGAACGAGGTTTCCTACCTTACTTTGATGATGGCTTCGTTGGTAGTCTTGGTACTTCACGCATATTGTTAA 303 0.4224 MFLLTDDTAMLWGVKFYNDFLMQAGPNGNVQSELLFRKDDSFMFDKGWGFPRRIYFNGDNCVMPPPDAYPWLPNAGLKNEVSYLTLMMASLVVLVLHAYC 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12485g00001 100 PANTHER PROTEIN COBRA 5 90 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12485g00001 Trme-Chr12485 917 1219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12485g00001 6 98 COBRA Gene Family AT3G02210 68.085 1.27e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12485g00001 - - gmx:100815926 166.007