Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme124663g00001 ATGATGGGAGTAGGAGCTGTTAAAACCGACAGCACGGCAATGTTAGTCGCGGGTTTTGCAGGATTAGTCGCAGGAGCATGTGGTATGGCGATAGGAGAATTTGTTTCGGTTTTCACTCAATATGAAGTTGAAGTTGGTCAAATGATGAGAGATTTAGGAACAAATGATAGAAAAGAAAAGGAATTGGAAATTGAGTTGGAGAAAAGGAGATCATTGCCTAATCCATTACAAGCTGCTTTAGCTTCTGCATTCTCATTTTCTATAGGTGGTTTGGTTCCTTTACTTAGTGGTTCATTTATAAGTGATTATAAGATAAGGCTTATTGTGATTGTTTCAATAGCTAGTTTGGCTTTGGTTGTTTTTGGAAGAGTTGGTGCTATACTTGGTAAGACACCAAAAATGAAATCTTCTATTAGGTTTCTTCTTGGTGGATGGATGGCTATGGCAATCACTTTTGGGTTAACTAAATTACTTGCACATTCTAGTGGTTTGGATTTTTGA 501 0.3752 MMGVGAVKTDSTAMLVAGFAGLVAGACGMAIGEFVSVFTQYEVEVGQMMRDLGTNDRKEKELEIELEKRRSLPNPLQAALASAFSFSIGGLVPLLSGSFISDYKIRLIVIVSIASLALVVFGRVGAILGKTPKMKSSIRFLLGGWMAMAITFGLTKLLAHSSGLDF 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme124663g00001 166 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 159 IPR008217 GO:0005384|GO:0030026
Trme124663g00001 166 Pfam VIT family 50 155 IPR008217 GO:0005384|GO:0030026
Trme124663g00001 166 Pfam VIT family 1 50 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme124663g00001 Trme-Chr124663 35 535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme124663g00001 1 164 Nodulin-like Gene Family AT3G43660 56.707 5.56e-61 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme124663g00001 K22736 - gmx:100791523 208.764